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A deep learning fusion model for accurate classification of brain tumours in Magnetic Resonance images

Abstract

Detecting brain tumours is complex due to the natural variation in their location, shape, and intensity in images. While having accurate detection and segmentation of brain tumours would be beneficial, current methods still need to solve this problem despite the numerous available approaches. Precise analysis of Magnetic Resonance Imaging (MRI) is crucial for detecting, segmenting, and classifying brain tumours in medical diagnostics. Magnetic Resonance Imaging is a vital component in medical diagnosis, and it requires precise, efficient, careful, efficient, and reliable image analysis techniques. The authors developed a Deep Learning (DL) fusion model to classify brain tumours reliably. Deep Learning models require large amounts of training data to achieve good results, so the researchers utilised data augmentation techniques to increase the dataset size for training models. VGG16, ResNet50, and convolutional deep belief networks networks extracted deep features from MRI images. Softmax was used as the classifier, and the training set was supplemented with intentionally created MRI images of brain tumours in addition to the genuine ones. The features of two DL models were combined in the proposed model to generate a fusion model, which significantly increased classification accuracy. An openly accessible dataset from the internet was used to test the model's performance, and the experimental results showed that the proposed fusion model achieved a classification accuracy of 98.98%. Finally, the results were compared with existing methods, and the proposed model outperformed them significantly.

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A deep learning fusion model for accurate classification of brain tumours in Magnetic Resonance images

Author: Zebari, Nechirvan Asaad
Publisher: Wiley
Year: 2024
DOI: 10.1049/cit2.12276
Source: https://dspace.vsb.cz/bitstreams/139f5b31-a93a-4c85-80ba-34547b7ab4c6/download
Recei ed: 2 June 2023
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Re ised: 30 July 2023
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Accep ed: 24 Augus 2023
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CAAI T ansac ions on In elligence Technology
DOI: 10.1049/ci 2.12276
ORIGINAL RESEARCH
A deep lea ning usion model o accu a e classi ica ion o b ain
umou s in Magne ic Resonance images
Nechi an Asaad Zeba i
1
|Chi a Nadhee Mohammed
2
|Dilo an Asaad Zeba i
3
|
Mazin Abed Mohammed
4,5,6
|Diya Qade Zeeba ee
7
|
Hayda Abdulamee Ma hoon
8,9
|Ka a Hameed Abdulka eem
10
|
Sei edine Kad y
11
|Wa ana Vi iyasi a a
12
|Jan Nedoma
5
|Radek Ma inek
6
1
Depa men o In o ma ion Technology, Lebanese F ench Uni e si y, E bil, I aq
2
Depa men o Compu e Science, Uni e si y o Zakho, Zakho, Ku dis an Region, I aq
3
Depa men o Compu e Science, College o Science, Naw oz Uni e si y, Duhok, Ku dis an Region, I aq
4
Depa men o A i icial In elligence, College o Compu e Science and In o ma ion Technology, Uni e si y o Anba , Ramadi, I aq
5
Depa men o Telecommunica ions, VSB‐Technical Uni e si y o Os a a, Os a a, Czech Republic
6
Depa men o Cybe ne ics and Biomedical Enginee ing, VSB‐Technical Uni e si y o Os a a, Os a a, Czech Republic
7
Depa men o Compu e Ne wo k and In o ma ion Secu i y, Technical College o In o ma ics – Ak e, Duhok Poly echnic Uni e si y, Duhok, I aq
8
In o ma ion and Communica ion Technology Resea ch G oup, Scien i ic Resea ch Cen e , Al‐Ayen Uni e si y, Thi‐Qa , I aq
9
College o Compu e Sciences and In o ma ion Technology, Uni e si y o Ke bala, Ka bala, I aq
10
College o Ag icul u e, Al‐Mu hanna Uni e si y, Samawah, I aq
11
Depa men o Applied Da a Science, No o Uni e si y College, K is iansand, No way
12
Facul y o Comme ce and Accoun ancy, Chulalongko n Business School, Chulalongko n Uni e si y, Bangkok, Thailand
Co espondence
Mazin Abed Mohammed.
Email: mazinalshujea y@uoanba .edu.iq
Funding in o ma ion
Minis y o Educa ion, You h and Spo s o he
Chezk Republic, G an /Awa d Numbe s: SP2023/
039, SP2023/042; he Eu opean Union unde he
REFRESH, G an /Awa d Numbe : CZ.10.03.01/
00/22_003/0000048
[Co ec ion added on 23 Jan 2024, a e i s online
publica ion. The a ilia ion and a ilia ion designa o
is upda ed].
Abs ac
De ec ing b ain umou s is complex due o he na u al a ia ion in hei loca ion, shape,
and in ensi y in images. While ha ing accu a e de ec ion and segmen a ion o b ain u-
mou s would be bene icial, cu en me hods s ill need o sol e his p oblem despi e he
nume ous a ailable app oaches. P ecise analysis o Magne ic Resonance Imaging (MRI) is
c ucial o de ec ing, segmen ing, and classi ying b ain umou s in medical diagnos ics.
Magne ic Resonance Imaging is a i al componen in medical diagnosis, and i equi es
p ecise, e icien , ca e ul, e icien , and eliable image analysis echniques. The au ho s
de eloped a Deep Lea ning (DL) usion model o classi y b ain umou s eliably. Deep
Lea ning models equi e la ge amoun s o aining da a o achie e good esul s, so he
esea che s u ilised da a augmen a ion echniques o inc ease he da ase size o aining
models. VGG16, ResNe 50, and con olu ional deep belie ne wo ks ne wo ks ex ac ed
deep ea u es om MRI images. So max was used as he classi ie , and he aining se
was supplemen ed wi h in en ionally c ea ed MRI images o b ain umou s in addi ion o
he genuine ones. The ea u es o wo DL models we e combined in he p oposed model
o gene a e a usion model, which signi ican ly inc eased classi ica ion accu acy. An
openly accessible da ase om he in e ne was used o es he model's pe o mance, and
he expe imen al esul s showed ha he p oposed usion model achie ed a classi ica ion
accu acy o 98.98%. Finally, he esul s we e compa ed wi h exis ing me hods, and he
p oposed model ou pe o med hem signi ican ly.
This is an open access a icle unde he e ms o he C ea i e Commons A ibu ion License, which pe mi s use, dis ibu ion and ep oduc ion in any medium, p o ided he o iginal wo k is
p ope ly ci ed.
© 2024 The Au ho s. CAAI T ansac ions on In elligence Technology published by John Wiley & Sons L d on behal o The Ins i u ion o Enginee ing and Technology and Chongqing
Uni e si y o Technology.
790
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CAAI T ans. In ell. Technol. 2024;9:790–804. wileyonlinelib a y.com/jou nal/ci 2
KEYWORDS
b ain umou , deep lea ning, ea u e usion model, MRI images, mul i‐classi ica ion
1
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INTRODUCTION
The b ain se es as he con ol and communica ion hub o he
body. I does his by u ilising a as ne wo k o connec ions
and neu ons o con ol all o he essen ial p ocesses ha occu
wi hin he body. A b ain umou is a condi ion ha could cause
li e‐ h ea ening consequences. The b ain's mal unc ion is
caused by he mul iplica ion o abno mal cells wi hin he b ain,
which also a ec s he neu ological sys em and he cen al
spine. I expands slowly, has clea ly delinea ed bo de s, and
a ely mo es beyond hem [1]. Because he e a e billions o
ac i a ed cells in he b ain, analysis can be p e y challenging.
B ain umou s a e one o he leading causes o mo ali y
among people. A ound 250,000 people wo ldwide a e diag-
nosed wi h p ima y b ain umou s e e y yea ; howe e , hese
umou s accoun o ewe han 2% o all cance s [2]. Con-
sis ency is p esen in benign umou s, which do no include any
cance cells ac i ely sp eading; in con as , malignan umou s
ha e s uc u al he e ogenei y and ac i e cance cells. Malignan
umou s also con ain ac i e cance cells. E en hough benign
umou s g ow slowly, he e is always a chance ha hey will
p og ess in o dange ous malignan umou s. Low‐g ade u-
mou s a e ano he e m ha may e e o benign umou s.
Low‐g ade umou s, e e ed o as benign umou s, can be
u he di ided in o wo dis inc ypes: gliomas and meningi-
omas. Glioblas oma and as ocy oma a e he wo ypes o high‐
g ade b ain umou s ha all in o he same ca ego y as ma-
lignan umou s, also known as high‐g ade b ain umou s. A
benign umou is no haza dous since i is no p e alen in
o he po ions o he b ain. Howe e , malignan umou s a e
inc edibly ha m ul because o hei quick g ow h. They can be
emo ed, and once hey a e gone, hey a ely come back.
Cance ous umou s can be di ided in o se e al unique sub-
ypes acco ding o a ious c i e ia, including he g ow h si e,
he deg ee o i s malignancy, and he kind o issue om which
i o igina ed [3].
Many ea men s a e a ailable o b ain umou s, and he
ea men chosen will ely on he posi ion, size, and kind o
umou . Due o he lack o unin ended side e ec s associa ed
wi h su ge y, i is now he mos common and p e e ed emedy
o b ain umou s compa ed o o he ea men s [4]. The
Magne ic Resonance Imaging (MRI) echnique is he mos
e ec i e and widesp ead in b ain umou diagnosis. The MRI
echnique p o ides in o ma ion on he s uc u e o human so
issue, which can be enla ged o o e p ecise iews in e e y
di ec ion. In he ield o medical imaging, MRI is applied o
display dis inc ions in a ious so issues [5]. The MRI image
can be in e p e ed o indica e he p esence o b ain umou s.
Magne ic Resonance Imaging images can ha e a ious cha -
ac e is ics, depending on he in e nal ana omical s uc u es
being examined. The MRI echnique is well‐known o i s
supe io pic u e cla i y and p ecise umou appea ance [6].
Diagnosing a b ain umou equi es a signi ican in es men o
ime and depends signi ican ly on he expe ience and expe ise
o he adiologis . Inc easing he pa ien numbe will cause a
signi ican inc ease in he amoun o da a ha has o be p o-
cessed. This has caused con en ional me hods o be ine icien
as well as expensi e. P oblems a ise due o signi ican a ia-
ions in umou size, o m, and se e i y and he p esen a ion o
o he diseases. These a iances can occu e en wi hin he same
pa ien . Con en ional manual me hods o iden i ying b ain
umou s and moni o ing hei p og ession o e ime a e
labo ious and e o ‐p one [7]. As a esul , au oma ed solu ions
a e necessa y o eplace con en ional human p ocedu es.
Recen e olu ions in a i icial in elligence and machine
lea ning (ML) ha e made i possible o diagnose b ain malig-
nancies ea lie . The e has been a ecen up ick in in e es in he
e olu ion o au oma ed sys ems o he analysis o images o
o e come he es ic ions ha come wi h manually diagnosing
pa ien s. Recen yea s ha e seen he de elopmen o se e al
compu e ‐aided diagnosis sys ems in ended o diagnose b ain
umou s au oma ically. Many academics ha e esea ched how
o classi y b ain umou s and implemen ed a ious me hods o
e alua e MRI scans o ex ac po en ial cha ac e is ics om he
da ase using ML and Deep Lea ning (DL) echniques. The
undamen al objec i e o his esea ch and analysis is o
imp o e p ocesses o he ea ly de ec ion o b ain umou s.
When de ec ing b ain cance s, p edic ing he cou se o he
umou , and ea ing b ain umou s, he au oma ic classi ica-
ion o medical images is signi ican [8]. When a b ain umou
is ound a an ea ly s age, i is mo e likely o ha e a quick e-
ac ion o ea men , which assis s in inc easing he su i al a e
o pa ien s. I equi es signi ican ime and labou o sea ch o
and ca ego ise images o b ain umou s manually con ained in
sizeable medical image a chi es [9].
Misdiagnosing a b ain umou can ha e signi ican e-
pe cussions and lowe he indi idual's likelihood o su i al. In
ligh o he g a i y o he si ua ion, he e is an u gen need o a
echnique ha elies en i ely on au oma ed p ocesses o iden-
i y b ain umou s. The manual p ocedu e o assessing se e al
pho og aphs p oduced in a clinic is a labou ‐in ensi e, ime‐
consuming app oach ha mus be e ised o comp ehend
how a ious cance s beha e ully. I is necessa y o de elop
echnology o de ec ing and iden i ying umou s ha a e mo e
accu a e and compu e ‐based o unde s and and sol e his
complica ed issue. Nowadays, a ious a emp s ha e been un-
de aken, all o digi ise his p ocess o in es iga e he many
di e en machine‐lea ning app oaches ha a e now a ailable.
The e has been a enaissance in in e es in he u ilisa ion o
deep ne wo ks o he iden i ica ion o cance cells in a manne
ha is bo h mo e accu a e and dependable [10]. Nume ous
me hods ha e been a emp ed o de elop an accu a e and
eliable compu e ised diagnosis o b ain umou s. Ye , i e-
mains challenging due o signi ican in e ‐and in a‐shape
a iances, ex u e di e ences, and con as di e ences. T adi-
ional ML me hods ely on manually p oduced ea u es,
ZEBARI ET AL.
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limi ing he solu ion's abili y o wi hs and challenges, while
DL‐based me hods can au oma ically ex ac use ul in o ma-
ion o imp o ed pe o mance. The no el y o his wo k lies
in he inno a i e combina ion o con olu ional deep belie
ne wo ks (CDBN) and ResNe 50 models as pa o a usion
model o b ain umou classi ica ion. The usion p ocess
in elligen ly combines local and global ea u es cap u ed by
CDBN and ResNe 50, espec i ely, esul ing in a mo e
comp ehensi e and disc imina i e ep esen a ion o b ain u-
mou s. This s udy de eloped a model‐based DL me hod o
classi y b ain cance s in o gliomas, meningiomas, pi ui a y u-
mou s, o no‐ umou classes. Ou con ibu ions include he
de elopmen o a DL‐based p ocess ha au oma ically ex ac s
aluable knowledge o imp o ed pe o mance in classi ying
b ain cance s, add essing he challenges posed by adi ional
ML me hods ha ely on manually p oduced ea u es. The key
con ibu ions o his s udy a e:
�The s udy de eloped a ully au oma ic app oach o mul i‐
classi ying b ain umou s using deep con olu ional neu al
ne wo ks (CNN) o ea u e ex ac ion.
�Deep CNN ne wo ks we e u ilised o ex ac he mos
ele an in o ma ion ea u es om he image and o be e
gene alisa ion. A model was buil o inco po a e deep ea-
u es and de elop he usion model o achie e be e pe -
o mance in he mul i‐classi ica ion accu acy o b ain
umou s.
�De elopmen o a DL usion model o eliably classi y b ain
umou s, signi ican ly inc easing classi ica ion accu acy
pe o mance.
�U ilisa ion o da a augmen a ion echniques o inc ease he
da ase size o aining models, enabling he DL model o
achie e good esul s.
�Compa ison o he p oposed model wi h exis ing me hods
demons a ed ha he p oposed model ou pe o med hem
signi ican ly, indica ing he e ec i eness o he p oposed
DL usion model o b ain umou classi ica ion.
The emaining sec ions o he pape a e laid ou as ollows.
A discussion o he mos ecen ela ed wo ks is p esen ed in
Sec ion 2. The p oposed mechanism includes all i s phases in‐
dep h, as discussed in Sec ion 3. The expe imen al esul s o
he p oposed model and a compa ison wi h he mos ecen
exis ing wo ks in he li e a u e a e gi en in Sec ion 4. A dis-
cussion ela ed o he p oposed me hod and p o ided esul s
ha e been p esen ed in Sec ion 5. The las Sec ion o his pape
discusses his esea ch's conclusion and ea u e wo k.
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RELATED WORK
O e he pas decade, ML and DL me hods ha e signi ican ly
con ibu ed o medical image analysis, making medical pe -
sonnel's wo k mo e e o less and e icien . When add essing
issues ela ed o b ain umou s, mos esea ch publica ions
ha e ocused on DL me hods such as CNNs, ans e
lea ning, and classical neu al ne wo ks. These app oaches
ha e p o en e ec i e in p o iding solu ions o b ain umou
classi ica ion.
A model‐based CNN was p esen ed by Khwaldeh e al.
[11] o dis inguish be ween umou and non‐ umou b ain MRI
images in addi ion o high and low g ades o glioma umou s.
They achie ed an accu acy a e o 91% by modi ying he
AlexNe ne wo k and u ilising i as he ounda ion o hei
ne wo k a chi ec u e. Despi e he c i ical wo k being done in
his ield, mo e e o is s ill equi ed o es ablish a obus and
p ac ical s a egy o classi ying MRI images o he b ain. Das
e al. [12] success ully iden i ied many o ms o b ain malig-
nancies using a CNN con aining 3064 MRI images. These
umou s included glioma umou s, meningioma umou s, and
pi ui a y umou s. In aining, he CNN ne wo k was ained o
use se e al con olu ional and pooling p ocesses. They could
do his by scaling he con olu ional ne wo k o co espond
wi h con olu ional il e s and ke nels o a ying sizes. As a
esul , hey achie ed an accu acy a e o 94.39%. In an in e-
g a ed app oach, Hashemzehi e al. [13] examined he abili y o
a CNN and neu al au o eg essi e dis ibu ion es ima ion
model o de ec b ain umou s om MRI da a. They employed
3064 images, which hey assessed o de e mine wi h a 96%
le el o accu acy h ee dis inc ypes o b ain cance .
A mul i‐pa hway CNN design was p esen ed by F ancisco
e al. [14] o segmen se e al kinds o umou s au oma ically.
They es ed hei sugges ed model by applying i o a T1‐
weigh ed, con as ‐enhanced MRI da ase made accessible o
he public and ound ha i had an accu acy o 97.3%. In
con as , he p ocess o model aining was qui e expensi e. A
deep incep ion esidual ne wo k was p oposed in e e ence
[15], which discussed a h ee‐class classi ica ion sys em o
b ain umou s. The laye ha is conside ed o be he ne wo k's
ou pu in ResNe V2 has been modi ied. The p oposed
app oach achie es he highes possible accu acy o classi ying
b ain umou s. The sugges ed model was alida ed by applying
i o a b ain imaging da ase ha can be accessed openly online
and con ains 3064 images. The pe o mance esul o he
p esen ed me hod is 99.69% be e han he mos ad anced
echniques in he li e a u e. Abd El Kade e al. [16] c ea ed a
deep‐CNN model o iden i y b ain umou s as no mal and
abno mal o MRI images. Employing a di e en ial ope a o in
he ained ne wo k allows o he gene a ion o an addi ional
di e en ial ea u e map, which can be ob ained om he CNN
ea u e map ha was ini ially used. The consequence o using
he app oach o de i a ion is an imp o emen in he e ec-
i eness o he me hod being p o ided, which is de e mined by
he ou come o he e alua i e pa ame e .
To classi y b ain umou s, ImageNe ‐based Vision T ans-
o me s (ViT) ha ha e been lea n and op imised we e sug-
ges ed by Tummala e al. [17]. Pe o mance alida ion, as well
as es ing, was conduc ed using h ee di e en classes o
umou da ase ha was ob ained om Figsha e. This da ase
includes 3064 T1w con as ‐enhanced MRI images ha con-
ained h ee ypes o umou s. A a size o 384 �384 pixels,
he L/32 model pe o med he bes , ea ning a sco e o 98.2%
on o e all accu acy. The e iciency o he ensembles o all ou
ViT me hods a he exac esolu ion exceeded he e iciency o
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each echnique and hei ensemble a esolu ion 224 �224.
The cos umes o he ou di e en ViT algo i hms achie ed a
es ing accu acy o a ound 98.7%. To di ide 3260 images in o
ou dis inc classes, Nayak e al. [18] de eloped an E i-
cien Ne model ha uses no malisa ion. This was done o
classi y he images. The newly cons uc ed model is a modi-
ica ion o E icien Ne ha includes adding wo o he laye s:
dense and d op‐ou . Simila ly, hey u ilised da a augmen a ion
in conjunc ion wi h no malisa ion. One o he ad an ages o
using a dense CNN model is ha i can e ec i ely classi y a
cons ained image da abase. As a consequence o his, he
echnique ha was sugges ed o e s ou s anding o e all pe -
o mance. Acco ding o he indings o he expe imen s, he
p oposed model had an accu acy o 99.97% when i was being
ained, and i had an accu acy o 98.78% when i was being
es ed. The egion‐based con olu ional neu al ne wo k
(RCNN) me hod was u ilised o c ea e a new ne wo k o b ain
umou iden i ica ion, and his a chi ec u e was alida ed by
using wo da ase s eely a ailable on Kaggle [19]. Resea che s
p o ided a echnique o diagnosing b ain umou s ha uses a
less complex ne wo k o minimise he equi ed ime o p o-
cessing by a con en ional RCNN. They i s employed a wo‐
channel CNN, a low‐complexi y model ha enhances accu acy
by 98.21%. This allowed hem o dis inguish be ween heal hy
and unheal hy umou MRI images. A e ha , his model is
used as a ea u e ex ac ion model in an RCNN o de ec
umou egions in a glioma class om he da ase classi ied
om an ea lie phase. Then, he umou egion is enclosed in
boxes. This me hod has also been applied o ea meningi-
omas and malignancies o igina ing in he pi ui a y gland. Thei
app oach, which had an o e all con idence le el o 98.8%, was
able o a ain a sho execu ion ime compa ed o o he
me hods conside ed o be s a e‐o ‐ he‐a .
The e a e nume ous me hods o iden i ying b ain u-
mou s, bu se e al limi a ions ha e ye o be de e mined. The
p ima y objec i e o his esea ch is o p o ide an e ec i e
diagnosis me hod o b ain umou s by u ilising di e en CNN
ne wo ks. Due o a lack o eadily a ailable knowledge and
da a, many adiologis s need help wi h his classi ica ion. P e-
ious esea ch has shown ha DL app oaches p o ide much
highe accu acy o b ain MRI classi ica ion han classical ML
echniques. Howe e , a as amoun o da a is equi ed o ain
DL models, which canno be achie ed wi h adi ional ML
echniques. Recen esea ch has es ablished DL app oaches as
a mains eam componen o specialis and in elligen sys ems
and medical image analysis. When dealing wi h b ain umou
classi ica ion, i is essen ial o conside he many cons ain s
associa ed wi h he discussed me hodologies.
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PROPOSED MODEL
This sec ion desc ibes ou p oposed app oach in gene al.
Then, in he succeeding subsec ions, we desc ibed he speci ics
o ou c i ical componen s in de ail. The p oposed sys em
includes p ep ocessing (such as image smoo hing, c opping,
esizing, and no malisa ion), da a augmen a ion, DL ea u e
ex ac ion, deep ea u e usion, and classi ica ion. These i e
undamen al phases make up he p oposed app oach. Figu e 1
p esen s a diag amma ic ep esen a ion o he gene al diag am
FIGURE 1 Rep esen a ion o all s eps o he p oposed model o b ain umou iden i ica ion.
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o ou model o iden i ying b ain umou s. The pe o mance
e alua ion o he sugges ed model has been es ed using T1‐
weigh ed da ase s. S anda d pe o mance measu emen s, such
as accu acy, ecall, p ecision, and F1‐sco e, we e employed o
es he pe o mance o he p oposed model.
3.1
|
P ep ocessing
Image p ep ocessing can also add ess o he signi ican in insic
MRI acquisi ion abno mali ies, such as in ensi y non‐
uni o mi y and Gaussian noise [20]. This is possible because
o he na u e o MRI. In ensi y non‐uni o mi y, in ensi y in-
homogenei y, o bias o he magne ic ield will show up as a
low‐ equency signal on an MRI due o a ious causes, such as
luc ua ion o he magne ic ield. Se e al di e en hings can
cause his signal. In o he olumes, di e en p ep ocessing
pipelines we e gi en so ha he ela ionship be ween image
p ep ocessing pa e ns and noise il e ing o MRI could be
s udied. This in es iga ion aimed o imp o e he ep oduc-
ibili y and eliabili y o adionics cha ac e is ics. In he MRI‐
based adiomics analysis, he lack o p e‐speci ic image no -
malisa ion me hods may impac he ea u es' consis ency and
dependabili y.
The Gaussian il e (GF) and he skull s ipping me hod
a e he p ima y s eps du ing he p e‐p ocessing o he p o-
posed model. The GF me hod has se e al ad an ages,
including educed noise, a mo e manageable design p ocess,
au oma ic il e ing, and o a ional symme y [20]. The image
can ha e Gaussian noise, sal and peppe noise e c. The in-
o ma ion con ained in ou da ase is p ese ed in a way ha is
analogous o noise emo al applica ions. To educe noise om
he image, he GF is used. This il e u ilises a 2D Gaussian
dis ibu ion unc ion, and his unc ion can be desc ibed as
ollows:
Gði;jÞ ¼ 1
2πσ2e−i2þj2
2σ2ð1Þ
Whe e he s anda d de ia ion dis ibu ion is ep esen ed by σ,
he alue o a Gaussian ke nel is used when designing a con-
olu ional il e o achie e he desi ed e ec . Magne ic Reso-
nance Imaging images need he applica ion o con olu ional
il e s o e e y single pixel in he image. In MRI images, ma ix
mul iplica ions a e pe o med on each pixel's b igh ness and
ke nel elemen s. This helps de ec b ain umou s ea lie . As a
consequence, he noise p esen in he MRI is elimina ed, and
a e ha , he image is e ined wi h he u ilisa ion o Gaussian
il e ing.
The pe o mance o iden i ying almos all o he images in
MRI da ase s o b ain umou s could be be e due o he
p esence o unwan ed oids and a eas in he images. Thus, i is
essen ial o c op he images o emo e any unnecessa y pa s
and ex ac only he ele an da a om he image. This wo k
employed he c opping me hod desc ibed in e . [21], which
in ol es calcula ing ex eme poin s. I is ad ised ha he MRI
images in ou da ase be esized o ha e he same wid h and
heigh o ob ain he bes possible esul s. This is because he
wid hs, heigh s, and sizes o he MRI images in ou da ase
a y. Since he size o he images ed in o Deep ne wo ks is
224 �224 pixels, we educed he MRI images o 224 �224
pixels o his ask. The excep ion is CDBN, which equi es he
inpu images o ha e a size o 128 �128 pixels.
The MRI image om he pa ien 's da abase needs o
p o ide mo e cla i y. The b ain umou s in MRI images
con ain a ce ain amoun o ambigui y. As a esul , b ain im-
ages equi e no malisa ion be o e any u he p ocessing can
ake place. Usually, images ob ained om an MRI a e g ayscale
in appea ance. As a esul , he images may be eadily no -
malised, which assis s in easing image quali y and educes he
likelihood o making e o s in classi ica ion. Nayak e al. [18]
used he membe ship unc ion wi h he mo phological no ion
o iden i y b ain cance s. The ollowing is an example o he
membe ship unc ion ha was u ilised o he s udy:
¼d−mn
mx −mn ð2Þ
While is conside ed a no malised image, i equals a
double image and is equal o min (min(image)) and max(max
(image)), espec i ely. Wi h a ange om 0 o 1, his mem-
be ship unc ion's p ima y pu pose is o s anda dise he image
in p epa a ion o enhancemen .
3.2
|
Deep ea u e ex ac ion
The deep ea u es we e ex ac ed om he MRI scans o b ain
umou s using h ee di e en deep‐lea ning ne wo ks:
VGG16, ResNe 50, and CDBN. A e ha , he ea u es a e
in eg a ed o p oduce da a ep esen a ions ha a e mo e ac-
cu a e. Because ea u e desc ip o s based on DL ha e he
po en ial o lea n undamen al ea u es au oma ically con ained
wi hin an MRI image, he u ilisa ion o hese desc ip o s can
conside ably lessen he necessi y o handc a ed ea u e
ex ac ion. This wo k aims o de ise an app oach o dis-
inguishing be ween MRI images o a ious ypes o b ain
umou s. A he end o he p ocess, hese ep esen a ions o
he ea u es a e ed o he classi ie laye , which hen ca ego-
ises hem in o one o se e al ca ego ies [22, 23].
3.2.1
|
ResNe 50
One o he mos sophis ica ed deep ne wo ks cu en ly a ail-
able o image classi ica ion is called ResNe 50. ResNe 50 can
handle he di icul y o imp o ing pe o mance accu acy while
concu en ly dec easing he pa ame e s whene e he model
canno be ained. Thus, a ea u e ex ac o ‐based deep con-
olu ional ha we u ilise is ResNe 50 [24]. ResNe 50 inc eases
he ne wo k's dep h, and he classi ica ion pe o mance based
on esidual lea ning is no impac ed. The emaining modules
each ha e wo possible ou pu s: one p oduces he esidual o
he inpu ea u e by pe o ming wo o h ee con olu ions on
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ha ea u e, and he o he makes he ou pu di ec ly om he
supplied ea u e. These wo pa hs' combined esul s a e
conside ed he esidual module's ou pu . Figu e 2 e eals ha
he ex ac ion o ea u es was accomplished wi h he help o
ResNe 50. When he ne wo k is ini ialised, he weigh s p e i-
ously p e‐ ained on MRI b ain umou da ase s a e employed.
The lea ned weigh s o deepe laye s, such as ResNe 50's
en i ely linked laye , end o be mo e class‐speci ic. We we e
cu ious abou how well he ou pu ec o s o he o me
con olu ional laye s migh be ca ego ised, and hen we an
some es s on hem. When u ilised p ope ly, ne wo ks ha
ha e deep con olu ional laye s a e key ea u es. As ea u e
ec o s, we used he inal esidual uni ou pu s gene a ed by he
con olu ional laye s 3, 4, and 5. The dimensions o he ea u es
ound in he hi d laye a e less han hose ound in he i h
laye . Table 1demons a es ha we conduc ed ou analysis
using ResNe 50.
3.2.2
|
CDBN model
When u ilising a Con olu ional DBN ne wo k, i is possible o
c ea e alid p obabilis ic conclusions e icien ly om he
bo om up and he op down [25]. On op o his s uc u e a e
nume ous laye s o max‐pooling con olu ional es ic ed
bol zmann machines (CRBMs), and aining is ca ied ou
using he g eedy laye ‐wise app oach, jus as i would be in a
ypical DBN. Using a CDBN model, one can lea n high‐le el
p ope ies such as s oke g oups o objec sec ions. Du ing
he es phase, we ained he CDBN u ilising wo laye s o
CRBM and elied on eed‐ o wa d app oxima ion o make ou
in e ences. On op o he CRBM is whe e he CDBN was
cons uc ed. I is easible o each he CDBN me hod by
ca ying ou a sequence o CRBMs, each eeding in o ano he
CRBM in he aining p ocess. The s uc u e o he CDBN is
depic ed in Figu e 3; i s isible and hidden laye s a e linked by
g oups o local and sha ed cha ac e is ics o he CRBM's
a chi ec u al design.
To de i e deep ea u es om an image, he DBN applies
se e al laye s o RBM on op o each o he in a mul ilaye .
Equa ion (3) p o ides his in o ma ion isually by g aphically
ep esen ing he join po en ial alloca ion in he isible laye
be ween he inpu da a and he l‐laye hidden laye hk. The
unsupe ised g eedy me hod is used o calcula e he weigh o
he da a. T aining he RBM's i s laye o calib a e i s i s
laye 's aining pa ame e s is he i s hing ha mus be done.
A e ha , he ou pu o he hidden laye o he i s RBM laye
is u ilised as he inpu o he RBM o he second laye , and he
pa ame e s o he i s laye a e g adually lea n . The inal
hidden laye is linked o he So Max eg ession classi ie , and
he supe ised G adien Descen algo i hm is used o inish he
ine‐ uning [26].
W�x;y1
;y2
;…;yl�¼ X
l−2
n¼0
Wyn��ynþ1�!W�yl−1
;yl�ð3Þ
P(y
l−1
,y
l
) has been desc ibed as he dis ibu ion o he p ob-
abili y be ween he wo le els o he opmos RBM, which a e
known as he isible and he bu ied laye s.
This wo k u ilises h ee con olu ional laye s wi h h ee
max‐pooling laye s. Table 2summa ises he pa ame e s o he
CDBN model in his s udy. We de e mined 2 �2 as he ke nel
window size in his wo k. Fo aining images, he numbe o
il e s in each laye has been inc eased by including a mo e
FIGURE 2 The ep esen a ion o implemen ed a chi ec u e o ResNe ‐50 ne wo k.
TABLE 1A chi ec u e o implemen ed RenNe ‐50 model o b ain
umou classi ica ion.
Laye Ou pu size 50‐Laye
Con 1 112 �112 7 �7�64, s ide 2
3�3 max pooling, s ide 2
Con 2‐�56 �56 2
4
1�1�64
3�3�64
1�1�256 3
5�3
Con 3‐�28 �28 2
4
1�1�128
3�3�128
1�1�512 3
5�4
Con 4‐�14 �14 2
4
1�1�256
3�3�256
1�1�1024 3
5�6
Con 5‐�7�72
4
1�1�512
3�3�512
1�1�2048 3
5�4
FLOPs 1 �1 A e age pooling, 1000 FC, so max
Abb e ia ion: FC, ully connec ed.
ZEBARI ET AL.
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complex pa e n. In he es ing phase, he CDBN model u i-
lised an image size o 128 �128 and a ba ch size 200.
3.2.3
|
VGG16 model
VGG16 is a deep con olu ional neu al ne wo k wi h 16 laye s,
and i is known o i s simplici y and e ec i eness. The
ne wo k akes an inpu image o a ixed size (224 �224 �3).
VGG16 consis s o mul iple con olu ional blocks, each con-
aining con olu ional laye s ollowed by max‐pooling laye s [8].
The con olu ional laye s ha e small 3 �3 il e s, and he max‐
pooling laye s use 2 �2 il e s wi h a s ide o 2 o down-
sample he spa ial dimensions. A e se e al con olu ional
blocks, he ne wo k has ully connec ed laye s o make he inal
p edic ions. The inal laye o he ne wo k p oduces he clas-
si ica ion p obabili ies o he di e en classes. The ep esen-
a ion o he implemen ed a chi ec u e o he VGG16 Ne wo k
is p esen ed in Figu e 4.
3.3
|
Fusion model
A mo e obus classi ica ion is achie ed h ough he usion
echnique, which in u n helps o inc ease he pe o mance o
he classi ica ion. Recen s udies demons a e ha he usion
p ocess imp o es classi ica ion pe o mance; ne e heless, he
mos signi ican downside is ha i akes much ime o
compu e, al hough ou p ima y objec i e is o acili a e he
pe o mance e alua ion o b ain umou s. Figu e 5p o ides a
isual ep esen a ion o he p oposed echnique o he usion
p ocess.
The classi ica ion sco es a e combined in o a single inal
sco e using his esea ch‐based sco e‐le el usion me hod,
which mo e de ini i ely de e mines he class. Th ough
decision‐le el usion, which may be u ilised o conclude, i is
easible o combine he classi ica ion decisions gene a ed by
se e al ea u e ec o s and di e en classi ie s in o a single
decision. The ou comes o he h ee models' decisions may be
inco po a ed in o a single ec o . The ea u es o wo DL
models (ResNe 50 and CDBN) we e in eg a ed o achie e
usion a he decision le el. Many o he p oblems ha ha e
been plaguing ML ha e ound an answe in usion modelling.
This is because i imp o es o e all pe o mance by combining
he p edic i e skills o se e al models in o one model. Se e al
aining da ase s o app oaches a e u ilised in he usion p o-
cess, which addi ionally inco po a es he p edic ed esul s o
each base model o o e a single an icipa ed pe o mance. As a
esul , he ac s may be mo e ai h ully po ayed. The pu pose
o combining many models is o educe he amoun o in o -
ma ion ha can be gene alised abou he o ecas . When many
models a e used, he inaccu acy in he classi ica ion diminishes,
p o ided ha he base models a e di e se and independen o
one ano he . Deep Lea ning syn hesis is an app oach ha aims
o inc ease p oduc i i y by consolida ing he diagnos ic con-
clusions d awn om a ious models in o a single, uni ied de-
cision. Addi ionally, da a usion is a subse o usion aining,
and he deg ee o in eg a ion be ween he wo da a ypes a -
ec s he classi ie used. Inco po a ion a his le el is an ici-
pa ed o imp o e classi ica ion pe o mance because he
ea u e se o a model con ains mo e in o ma ion abou he
MRI images han all in eg a ed classi ie s. A decision usion, on
he o he hand, comp ises a p ojec ed decision ha is p o ided
o classi ying he ou come.
In he b ain umou classi ica ion wo k desc ibed in he
p o ided in o ma ion, So Max is used as he inal classi ie in
he DL usion model. A e he ea u e ex ac ion and usion
p ocess using CDBN and ResNe 50, he used ea u e ec o is
ed in o he So Max unc ion in he ou pu laye o mul iclass
classi ica ion. The So Max unc ion akes he used ea u e
FIGURE 3 The ep esen a ion o implemen ed a chi ec u e o CDBN ne wo k. CDBN, con olu ional deep belie ne wo ks.
TABLE 2Implemen ed CDBN a chi ec u e.
Laye s Inpu size
Inpu size 128 �128
Numbe o laye s 2
Con ‐1 7 �7 [32 �124 �124]
Max‐pooling laye 2 �2 [32 �62 �62]
Con ‐2 5 �5 [64 �58 �58]
Max‐pooling laye 2 �2 [64 �29 �29]
Con ‐3 6 �6 [128 �24 �24]
Max‐pooling laye 2 �2 [128 �12 �12]
Ba ch size 200
Epoch 50
Lea ning a e 0.001
Abb e ia ion: CDBN, con olu ional deep belie ne wo ks.
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ec o as inpu . I ans o ms i in o a p obabili y dis ibu ion
o e he ou b ain umou classes: gliomas, meningiomas,
pi ui a y umou s, and no‐ umou class [18]. The So Max
unc ion calcula es he p obabili y ha he inpu image belongs
o each class, ensu ing ha he sum o all p obabili ies equals 1.
The class wi h he highes p obabili y ou pu by he So Max
unc ion is conside ed he p edic ed class o he inpu b ain
umou image. This So Max classi ica ion allows he model o
make con iden and calib a ed p edic ions ac oss mul iple
classes, p o iding he p obabili ies associa ed wi h each class
o a mo e in o ma i e ou pu . By employing So Max as he
classi ie , he model can e ec i ely handle he mul i‐class na-
u e o he b ain umou classi ica ion ask, p o iding accu a e
and in e p e able p edic ions o di e en umou ypes. The
use o So Max as he inal ac i a ion unc ion aligns wi h bes
p ac ices o mul iclass classi ica ion asks in DL. I is likely a
key ac o con ibu ing o he high e alua ion me ics achie ed
in he s udy. The So Max unc ion is a ma hema ical unc ion
used o mul iclass classi ica ion. Gi en a ec o o aw sco es
o each class, he So Max unc ion con e s hese sco es in o
a p obabili y dis ibu ion, ep esen ing he likelihood o he
inpu belonging o each class; in compa ison, he inpu logi s
o each class a e deno ed as a ec o z=[z1, z2, …, zK],
whe e K is he numbe o classes. The So Max unc ion o
he class kis de ined as ollows: Addi ionally, da a usion is a
subse o usion aining, and he deg ee o in eg a ion be-
ween he wo da a ypes a ec s he classi ie used. Inco po-
a ion a his le el is an icipa ed o imp o e classi ica ion
FIGURE 4 The ep esen a ion o implemen ed a chi ec u e o VGG16 ne wo k.
FIGURE 5 Rep esen a ion o he aining s eps o VGG16, ResNe 50, CDBN, and p oposed usion models. CDBN, con olu ional deep belie ne wo ks.
ZEBARI ET AL.
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pe o mance because he ea u e se o a model con ains mo e
in o ma ion abou he MRI images han all in eg a ed classi-
ie s. A decision usion, on he o he hand, comp ises a p o-
jec ed decision ha is p o ided o classi ying he ou come.
So maxðzkÞ ¼ expðzkÞ
PðexpðziÞÞ;i¼1 o K ð4Þ
He e, exp(zk) is he exponen ial unc ion. The So Max
unc ion applies he exponen ial unc ion o each logi and
hen di ides i by he sum o he exponen ials o all logi s. This
no malisa ion s ep ensu es ha he ou pu alues a e non‐
nega i e and sum up o 1, c ea ing a alid p obabili y dis i-
bu ion. The ou pu o he So Max unc ion is a ec o o
p obabili ies [p1, p2, …,pK], whe e each elemen p_i ep e-
sen s he p obabili y o he inpu belonging o class i. The class
wi h he highes chance is ypically chosen as he p edic ed
class o he in o ma ion. Ma hema ically, So Max mul i‐class
classi ica ion can be gi en as ollows: Inpu : z=[z1, z2, …,
zK] (logi s o each class) Ou pu : P obabili y dis ibu ion [p1,
p2, …, pK]whe e p_i=exp(z_i)/∑(exp(z_i)) o i =1 o K.
4
|
RESULTS AND DISCUSSIONS
4.1
|
Da ase
A da ase downloaded om he Kaggle websi e was used in
his s udy o alida e he pe o mance e alua ion o he sug-
ges ed model [27]. Table 3p o ides an o e iew o he in-
o ma ion associa ed wi h he da ase . Figu e 6p o ides
illus a i e examples o some samples. The collec ion con ains
3264 MRI images, each ep esen ing one o ou di e en
classes o b ain umou s. The alida ion o he expe imen is
ca ied ou in a speci ic manne by pa i ioning he da ase in o
wo hal es acco ding o he p opo ion o he size o he
aining da ase o he es ing da a, which was 2870 aining
da a samples o 394 es ing da a samples. Py hon 3.6.5 was
used as he ool o do he simula ion o he sugges ed model.
Some lib a ies ha e been used o w i e he code, including
Ke as and Tenso Flow. The ha dwa e sys em employed had
32 GB o RAM and an i5 9 h Gene a ion p ocesso . The
ollowing alues ha e been speci ied o each pa ame e :
lea ning a e was 0.01, d opou was 0.5, ba ch size was 5, epoch
coun was 50, and ac i a ion was ReLU.
4.2
|
Pe o mance me ics
This sec ion con ains he ou e iciency me ics applied o
assess how well he p oposed me hod pe o med. The o he
pe o mance measu es ha a e accessible a e all di e en i -
e a ions o he speci ied pe o mance measu emen s. Accu acy
is one o he ou leading pe o mance indica o s because i
p o ides in o ma ion abou he o e all pe o mance o he
sugges ed app oach. By u ilising Equa ions (5)–(8), addi ional
pe o mance me ics, including Recall, P ecision, and F‐Sco e,
a e employed o analyse he sugges ed model's alid posi i e
and ac ual nega i e a es.
The accu acy measu e o e s de ini ions o he glioma,
meningioma, pi ui a y, and non‐ umou classes depic ed in he
labelled images. Equa ion (5) is he ac o ha de e mines how
accu a e he p oposed model is. In Equa ion (5), T ue Posi i e
deno es cases ha ha e been success ully iden i ied as posi i e,
and T ue Nega i e indica es cases ha ha e been success ully
ecognised as nega i e. Samples ha ha e been success ully
iden i ied as being imp ope ly classi ied a e deno ed by he
no a ion False Nega i e. In con as , False Posi i e ep esen s
cases ha ha e been w ongly iden i ied as being co ec ly
iden i ied. Recall ha i is u ilised o quan i y he pe cen age o
genuine posi i e cases we could success ully o esee by
employing ou model. In o he wo ds, i can show us how
accu a e ou p edic ions we e. To compu e he ecall me ic,
Equa ion (6) is u ilised. P ecision is a measu emen used o
de e mine how many o he accu a ely classi ied cases ac ually
u ned ou o be posi i e. Equa ion (7) is employed o calcula e
he a e o p ecision. F‐Sco e is a measu e o ep esen ing he
TABLE 3The dis ibu ion o he da ase .
Class T aining Augmen ed Tes ing
Glioma‐ umou 826 2478 100
Meningioma‐ umou 822 2466 115
Pi ui a y‐ umou 827 2481 74
No‐ umou 395 1185 105
To al 2870 8610 394
FIGURE 6 Da ase samples used o e alua e he p oposed model.
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ZEBARI ET AL.
24682322, 2024, 4, Downloaded om h ps://ie esea ch.onlinelib a y.wiley.com/doi/10.1049/ci 2.12276 by Technical Uni e si y Os a a, Wiley Online Lib a y on [25/09/2024]. See he Te ms and Condi ions (h ps://onlinelib a y.wiley.com/ e ms-and-condi ions) on Wiley Online Lib a y o ules o use; OA a icles a e go e ned by he applicable C ea i e Commons License