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Engineering nanoscale glyco-zeolitic-imidazolate frameworks: Insights into the mechanism of formation

Abstract

The efficient encapsulation of large carbohydrates into porous metal-organic frameworks (MOFs), and not simply attached to the MOF's surface, is still challenging and underexplored. In this work we have investigated the scope of an optimized synthetic procedure following a biomimetic mineralization strategy for the encapsulation of a variety of therapeutic glycolipids within a Zeolitic-Imidazolate Framework-8 nanostructure (GlycoZIFs). In all cases, regardless of the glycosidic linkage nature of the glycolipid, we obtained uniform, crystalline and reproducible GlycoZIFs nanoparticles by using the same optimized experimental conditions, which demonstrate the versatility of our approach. Our experimental data revealed that the formation of glyco-micelles, by taking advantage of the surfactant-like character of these glycolipids, is key to promote the nucleation of ZIF-8 around, allowing thus a precise control of the spatial location and amount of glycodrug encapsulated in each ZIF-particle. In turn, the electronic structure calculations showed that there is a strong interaction between the hydroxyl groups in positions C3 and C4 of the glycone core of the glycolipid and the Zn atoms on the ZIF-8 surface, suggesting that those favourable glyco-ZIF interactions also played an important role to induce the ZIF-8 nucleation. Experimental control data and computational studies obtained with a protected glycolipid featuring O-acetyl groups supported that conclusion.

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Engineering nanoscale glyco-zeolitic-imidazolate frameworks: Insights into the mechanism of formation

Author: Rodríguez Marín, Rocío; Rodríguez Gómez, Salvador; Hamad, Said; Sánchez Fernández, Elena Matilde; Carrillo Carrión, Carolina
Publisher: Elsevier
Year: 2025
DOI: 10.1016/j.mtchem.2025.102546
Source: https://idus.us.es/bitstreams/82229aad-1317-434d-9cb2-b053624c3d4d/download
Enginee ing nanoscale glyco-zeoli ic-imidazola e amewo ks: Insigh s in o
he mechanism o o ma ion
Rocío Rod íguez-Ma ín
a,1
, Sal ado R.G. Bales a
b,1
, Said Hamad
b
,
Elena M. S´
anchez-Fe n´
andez
a,**
, Ca olina Ca illo-Ca i´
on
c,*
a
Depa men o O ganic Chemis y, Facul y o Chemis y, Uni e si y o Se illa, C/ P o eso Ga cía Gonz´
alez 1, 41012, Se illa, Spain
b
Depa men o Physical, Chemical, and Na u al Sys ems, Uni e si y Pablo de Ola ide, C a. U e a km 1, 41013, Se illa, Spain
c
Ins i u e o Chemical Resea ch (IIQ), CSIC-Uni e si y o Se ille, A da. Am´
e ico Vespucio 49, 41092, Se illa, Spain
ARTICLE INFO
Keywo ds:
Zeoli ic-imidazola e amewo ks
Glycomime ics
Glycolipids
De no o encapsula ion
Elec onic s uc u e calcula ions
ABSTRACT
The e icien encapsula ion o la ge ca bohyd a es in o po ous me al-o ganic amewo ks (MOFs), and no simply
a ached o he MOF’s su ace, is s ill challenging and unde explo ed. In his wo k we ha e in es iga ed he scope
o an op imized syn he ic p ocedu e ollowing a biomime ic mine aliza ion s a egy o he encapsula ion o a
a ie y o he apeu ic glycolipids wi hin a Zeoli ic-Imidazola e F amewo k-8 nanos uc u e (GlycoZIFs). In all
cases, ega dless o he glycosidic linkage na u e o he glycolipid, we ob ained uni o m, c ys alline and
ep oducible GlycoZIFs nanopa icles by using he same op imized expe imen al condi ions, which demons a e
he e sa ili y o ou app oach. Ou expe imen al da a e ealed ha he o ma ion o glyco-micelles, by aking
ad an age o he su ac an -like cha ac e o hese glycolipids, is key o p omo e he nuclea ion o ZIF-8 a ound,
allowing hus a p ecise con ol o he spa ial loca ion and amoun o glycod ug encapsula ed in each ZIF-pa icle.
In u n, he elec onic s uc u e calcula ions showed ha he e is a s ong in e ac ion be ween he hyd oxyl
g oups in posi ions C3 and C4 o he glycone co e o he glycolipid and he Zn a oms on he ZIF-8 su ace,
sugges ing ha hose a ou able glyco-ZIF in e ac ions also played an impo an ole o induce he ZIF-8
nuclea ion. Expe imen al con ol da a and compu a ional s udies ob ained wi h a p o ec ed glycolipid
ea u ing O-ace yl g oups suppo ed ha conclusion.
1. In oduc ion
The implemen a ion o e icien syn he ic s a egies aimed a
designing glycomime ic d ugs making use o a chemically e sa ile
amewo k e med sp
2
-iminosuga , has gi en ise o an ex ensi e
collec ion o me abolically s able sp
2
-iminoglycolipids (sp
2
-IGLs) wi h
immunomodula o y capabili ies. They p esen ema kable ac i i y
agains pa hological complica ions de i ed om in lamma o y e en s (i.
e., diabe ic e inopa hy and neph opa hy, as hma, and acu e in lam-
ma ion), p oli e a ion o umo cells o e en in ec ions caused by pa -
asi es [1]. In he con ex o in lamma ion-associa ed diseases, an
ex emely complex egula o y ne wo k akes place du ing he in lam-
ma o y p ocess, in ol ing wo ypes o cellula esponses, p oin-
lamma o y and an iin lamma o y, which a e ac i a ed by comple ely
di e en signals. An imbalance o bo h esponses leads o dys egula ion
o he immune sys em, igge ing he in lamma o y esponse. Se e al
wo ks ha e poin ed ou he ole o some sp
2
-IGLs as modula o s o he
immune esponse, esul ing in a dec ease o he exp ession o p oin-
lamma o y cy okines along wi h he concomi an inc ease o an iin-
lamma o y ma ke s [1]. In he con ex o cance , sp
2
-IGLs demons a ed
o educe bo h he p oli e a ion and he mig a ion o malignan cells
suppo ing hei abili ies as an imi o ic, p oapop o ic, and an i-
me as a ic agen s. Likewise, he g ow h inhibi ion o in acellula o ms
o he pa asi e Leishmania dono ani by some sp
2
-IGLs aised hei po-
en ial as an ileishmanial agen s.
The p i ileged s uc u e o he sp
2
-iminosuga s, ca bohyd a e-based
analogues ea u ing a pseudoamide- ype unc ionali y wi h sp
2
-hyb id-
a ion, makes i a sui able sca old o pe o m N-, C-, O-, S-, Se-glyco-
sida ion eac ions by di e en and e icien syn he ic me hodologies [2,
3]. In ecen yea s, b owsing he aglycone space o hese amphiphilic
* Co esponding au ho .
** Co esponding au ho .
E-mail add esses: [email p o ec ed] (E.M. S´
anchez-Fe n´
andez), [email p o ec ed] (C. Ca illo-Ca i´
on).
1
Equal con ibu ion.
Con en s lis s a ailable a ScienceDi ec
Ma e ials Today Chemis y
jou nal homepage: www.jou nals.else ie .com/ma e ials- oday-chemis y/
h ps://doi.o g/10.1016/j.m chem.2025.102546
Recei ed 24 Sep embe 2024; Recei ed in e ised o m 30 Decembe 2024; Accep ed 22 Janua y 2025
Ma e ials Today Chemis y 44 (2025) 102546
A ailable online 31 Janua y 2025
2468-5194/© 2025 The Au ho s. Published by Else ie L d. This is an open access a icle unde he CC BY-NC license ( h p://c ea i ecommons.o g/licenses/by-
nc/4.0/ ).
molecules by nume ous s uc u e-biological ac i i y ela ionship s udies
ha e allowed us o selec some sp
2
-IGL-based immunomodula o y gly-
cod ugs bea ing a hyd ophobic ail, speci ically a dodecyl lipid chain
(C
12
H
25
) a ached o di e en unna u al glycosidic connec o s (sul ox-
ides, sul ones, selenou eas, hiou eas, among o he s) [4,5]. The la ge
numbe o pa hological p ocesses in which sp
2
-IGLs can in e ene,
p o iding signi ican pha macological bene i s, makes hem an
ou s anding g oup o s able chemical and s uc u al ca bohyd a e mi-
me ics wi h g ea added alue. Two ep esen a i e examples o his
amily o sp
2
-glycolipids selec ed by hei ema kable he apeu ic
p ope ies in in lamma o y in i o models a e depic ed in Scheme 1A
(compounds 1 [6] and 2 [7]). The body o esul s achie ed om
di e en p eclinical models spanning om in i o, ex i o and in i o
assays, ce ainly e lec s he bene i s igge ed by a a ie y o sp
2
-IGLs
agains dele e ious e ec s p o oked by ad e se in lamma o y p ocesses
[1,8,9].
Howe e , a cons aining ac o o hese glycod ugs, and also
equen ly ound in o he amphiphilic pha macological agen s, is hei
low solubili y in aqueous solu ions and biological luids, es ic ing hei
in i o sys emic bioa ailabili y. Inc easing d ug doses ha o se he
poo biodis ibu ion is no conside ed a sui able op ion due o he po-
en ial unwan ed e ec s, hence d ug solubili y enhancemen has
become a challenging ask o he scien i ic communi y o e he yea s
[10]. The use o nanopa icle (NP)-based echnology ha enables mo e
e icien deli e y o he bioac i e loaded compound is well ecognized as
an appealing he apeu ic app oach. Among he di e se ypes o NPs used
as nanoca ie s (lipid-based NPs, polyme ics, lipid-polyme hyb ids,
ino ganics), me al-o ganic amewo ks (MOFs)-based d ug deli e y
sys ems (DDSs) ha e ecen ly achie ed p ominen accomplishmen s in
he biomedicine ield when p epa ed on a nanome ic scale (nanoMOFs)
[11–13]. The unique ea u es o some amilies o nanoMOFs (e.g., high
d ug loading capaci y, good biocompa ibili y, unable po osi y and
chemical composi ion, con olled and unable bios abili y o minimize
hei in i o accumula ion) le hem o be conside ed one o he mos
p omising candida es o de eloping in acellula DDSs [13].
Al hough a g ea numbe o small he apeu ic molecules has been
succes ully loaded in o MOFs o acili a e cell-up ake and a ain
imp o ed he apeu ic p ope ies [14], he encapsula ion o la ge bio-
molecules (e.g., p o eins, nucleic acids, ca bohyd a es) in a p ecise and
con olled way is no an easy endea ou . Symme y de ec and labile
me al-ligand coo dina ion a e he main obs acles o syn hesis o
well-o de ed c ys alline ma e ials inco po a ing biomolecules. Signi i-
can ad ances ha e been achie ed in he las yea s o he encapsula ion
o p o eins and nucleic acids [14–17]; howe e , he encapsula ion o
ca bohyd a es has been spa sely epo ed so a . To he bes o ou
knowledge, only Falca o and cowo ke s ha e inco po a ed a a ie y o
glycosaminoglycan (GAG)-based d ugs in me al-azola e amewo ks
[18]. They obse ed ha a e encapsula ing he GAGs, he c ys allini y
and con ol on he pa icle size o he esul ing biocomposi es we e
se iously comp omised, which may impose signi ican limi a ions in
hei u he he apeu ic applica ions. Using a di e en syn he ic s a -
egy, ou g oup has ecen ly epo ed he con olled encapsula ion o a
glycolipid wi hin ZIF-8, speci ically a selenium-based sp
2
-IGL (com-
pound 1, Scheme 1A), wi h a p ecise con ol on he spa ial dis ibu ion
o he glycod ug [19]. Ou me hod o he p epa a ion o 1@ZIF nano-
pa icles was ca ied ou unde mild condi ions a oom empe a u e
(RT) and in wa e , p e en ing hus he po en ial deg ada ion o inac i-
a ion o he bioac i e glycolipid mime ics du ing hei encapsula ion,
and p o ec ing hem as hey a el o a ge cells. In addi ion, by
exploi ing he pH-dependen deg ada ion o he ZIF-8 s uc u e, we
a ained an e icien in acellula deli e y o he glycod ug unde he
acidic condi ions inside endosomes upon up ake. This allowed us o
demons a e, o he i s ime, he syne gis ic an ioxidan e ec o
1@ZIF nanopa icles in human endo helial cells. No ably, 1@ZIF was
also able o e e se, o a ce ain le el, he oxida i e s ess induced in
cells, which was bene icial o p ese ing c i ical endo helial unc ions
such as angiogenesis and cell mig a ion [19].
Encou aged by his ecen achie emen , he ein we se ou o explo e
whe he he syn he ic me hodology applied o he encapsula ion o he
selenium-con aining glycomime ic 1 in ZIF-8 was ex ensible o o he
iminosuga -based d ugs, aimed o in es iga e he e sa ili y o ou
op imized app oach o he syn hesis o a collec ion o di e se GlycoZIFs
wi h no ewo hy he apeu ic applica ions. The selec ed sp
2
-IGLs (com-
pounds 1–5, Scheme 1A) ea u e di e en glycosidic linkage- ypes (i.e.,
selenou ea, sul u a om and sul one unc ionali y), and also p esen
di e ences in hei glycone moie y, speci ically he lack o hyd oxyl
g oup in C2 posi ion in compounds 3 and 4 ( e med 2-deoxy-sp
2
-IGLs),
and he blocking o hyd oxyl g oups in C3/C4 posi ions by O-ace yl
g oups (compound 5). Wi h his se o glycolipids, we will be able o
e alua e he in luence o bo h he aglycone na u e and he saccha ide
esidue on he physico-chemical p ope ies o he syn hesized GlycoZIFs.
Combining expe imen al and compu a ional s udies, we plan o in es-
iga e he encapsula ion mechanism o he glycolipid in o he ZIF-
s uc u e and o de ine he key s uc u al ea u es equi ed o he suc-
cess ul o ma ion o he GlycoZIFs, which will allow us o p edic , in he
nex u u e, he possible ex ension o he me hod o o he amilies o
ca bohyd a e-based d ugs.
Scheme 1. (A) Gene al ep esen a ion o he sp
2
-iminosuga -based glycod ugs, and speci ic chemical s uc u es o he glycomime ics s udied: sp
2
-IGLs (1, 2), 2-
deoxy-sp
2
-IGLs (3, 4) and di-O-ace yla ed-2-deoxy-sp
2
-IGL (5). (B) Schema ic ep esen a ion o he one-po syn hesis o GlycoZIFs nanopa icles, indica ing he main
objec i es planned in his wo k.
R. Rod íguez-Ma ín e al.
Ma e ials Today Chemis y 44 (2025) 102546
2
2. Ma e ials and me hods
2.1. Syn he ic p ocedu e o he p epa a ion o glycod ugs
Full s uc u al cha ac e iza ion o new 2-deoxy-sp
2
-IGLs is desc ibed
in de ail in he Suppo ing in o ma ion (Scheme S1, Figs. S1–S3). The
ollowing compounds: (1S)-(N
′
-dodecylselenou eido)-5N,6O-oxome hy-
lidenenoji imycin (1) [6], (1R)-1-dodecylsul onyl-5N,6O-oxome hyli-
denenoji imycin (2) [20], 3,4-di-O-ace yl-5N,6O-(oxome hylidene)
noji imycin iminoglycal [21] and (1R)-3,4-di-O-ace yl-2-deox-
y-1-S-dodecyl-5N,6O-oxome hylidene-1- hionoji imycin (5) [22], we e
p epa ed acco ding o p e iously epo ed p ocedu es. The wo no el
2-deoxy-
α
-glycomime ics, 3 and 4, we e success ully syn hesized
ollowing he op imized syn he ic p o ocol epo ed by ou g oup o he
s e eoselec i e syn hesis o iminosuga 2-deoxy- hioglycosides om he
bicyclic sp
2
-iminoglycal ca bama e p omo ed by ce ium(IV) ammonium
ni a e in he p esence o dodecane-1- hiol [22]. Nex , oxida ion o he
sul u a om o he esul ing di-O-ace yla ed-2-deoxy-
α
-S-glycoside (5)
employing an excess o me a-chlo ope benzoic acid (MCPBA) p o ided
he
α
-glycosylsul onyl de i a i e. Subsequen dep o ec ion eac ions
unde basic condi ions o he oxidized sp
2
-IGL and i s p ecu so hio-
e he led o he a ge ully unp o ec ed compounds 3 and 4 in excellen
yields (see ESM o de ails, Scheme S1). The chemical s uc u es o he
as-syn hesized 2-deoxy-sp
2
-IGLs we e con i med by nuclea magne ic
esonance (NMR), mass spec ome y (MS) and elemen al analysis (see
ESM). As expec ed, analysis o he coupling cons an s (J
1,2a
~ 5–7 Hz)
e ealed he exclusi e o ma ion o he
α
-anome s in bo h cases due o
he p onounced anome ic e ec p esen in his amily o compounds [1].
2.2. Syn hesis o GlycoZIFs
The co esponding GlycoZIFs we e p epa ed ollowing he expe i-
men al p ocedu e epo ed ecen ly by ou g oup [19]. B ie ly, 3 mL o
an aqueous solu ion o zinc ni a e (Zn(NO
3
)
2
⋅6H
2
O; 25 mM) was added
o e 3 mL o an aqueous solu ion o 2-me hylimidazol (HmIM; 1.3 M) a
RT unde con inuous s i ing (350 pm). Nex , 0.6 mL o a me hanolic
solu ion o he co esponding sp
2
-IGL (1–4; 10 mM) was added d opwise
unde s i ing. The esul ing mix u e was s i ed o 2 min and le o
s and o 2 h. The appea ance o a homogeneous u bidi y o e ime is
indica i e o he o ma ion o he GlycoZIFs pa icles. A e 2 h, he
pa icles we e collec ed by cen i uga ion (12,000 c , 15 min) and
washed h ee imes wi h me hanol (MeOH). Finally, he pa icles we e
edispe sed in MeOH a a concen a ion o 10 mg/mL and s o ed in he
idge (4 ◦C) un il use. The as-p epa ed GlycoZIFs we e named 1@ZIF,
2@ZIF, 3@ZIF, 4@ZIF. The same expe imen al condi ions we e
employed using he p o ec ed sp
2
-IGL (1R)-3,4-di-O-ace yl-2-deox-
y-1-S-dodecyl-5N,6O-oxome hylidene-1- hionoji imycin (5) o a o d
5@ZIF.
2.3. Syn hesis o ZIF-8 pa icles as con ols
Two ypes o ZIF-8 con ol pa icles we e syn hesized, ZIF-8 con ol 1
(ZIF-8/Cn 1) and ZIF-8 con ol 2 (ZIF-8/Cn 2), ollowing he same
expe imen al p ocedu e desc ibed abo e bu eplacing he sp
2
-IGL so-
lu ion by he addi ion o 0.6 mL o MeOH in he case o ZIF-8/Cn 1 o 3
mL o an aqueous solu ion o ce yl ime hylammonium b omide (CTAB;
2.0 ×10
−3
M) in he case o ZIF-8/Cn 2. In bo h cases, he pu i ica ion
s ep was iden ical as ha pe o med wi h he co esponding GlycoZIFs.
ZIF-8/Cn 1 and ZIF-8/Cn 2 pa icles we e inally edispe sed in MeOH
a a concen a ion o 10 mg/mL and s o ed in he idge (4 ◦C) un il use.
2.4. Gene al in o ma ion o cha ac e iza ion o GlycoZIFs
T ansi ion Elec on Mic oscopy (TEM) images we e acqui ed using a
JEOL TEM 1400 ope a ed a 200 kV. Samples we e p epa ed by d ying a
dilu ed dispe sion o he pa icles on 200 mesh coppe g ids coa ed wi h
Fo m a /ca bon ilm.
Measu emen s o dynamic ligh sca e ing (DLS) and ze a-po en ial
(ζ-po en ial) we e pe o med using a Mal e n Ze asize Nano ZSP
equipped wi h a 10 mW He–Ne lase ope a ing a a wa eleng h o 633
nm and ixed sca e ing angle o 173◦. Fo DLS analysis, dilu ed samples
we e loaded in o a qua z cu e e and h ee measu emen s, each con-
sis ing o wel e da a uns, we e aken a RT a e an equilib a ion s ep
o 120 s. The ζ-po en ial o he nanopa icles dispe sed in Milli-Q wa e
was measu ed wi h lase Dopple anemome y (LDA) by using he same
Mal e n Ze asize Nano ZSP ins umen .
High-pe o mance liquid ch oma og aphy-mass spec ome y
(HPLC-MS) analysis we e done using a Wa e s Alliance 2695 HPLC
coupled o an ESI-ion ap mass spec ome e ins umen (B uke
AmaZon). Samples we e analyzed using 0.1 % o mic acid elu ing g a-
dien s a a low a e o 0.3 mL/min. Spec a we e egis e ed in bo h
posi i e and nega i e modes in he m/z 100–2000 ange.
Powde X-Ray Di ac ion (PXRD) was pe o med using a B uke D8-
Ad ance Di ac ome e . X- ay adia ion o Cu K
α
was used, and he
measu emen ange was om 5◦ o 70◦(2θ) wi h a s ep o 0.02◦(2θ).
1
H NMR spec a o he GlycoZIFs we e eco ded in CD
3
OD using a
400 MHz B uke A ance III HD spec ome e .
N
2
so p ion iso he ms (77 K) o powde samples we e ca ied ou in a
Mic ome i ics T is a II 3020 sys em. Be o e analysis, samples we e
degassed unde acuum o 18 h a 120 ◦C. The appa en su ace a eas
we e calcula ed om he Ba e –Emme –Telle (BET) me hod in he
p essu e in e al P/P
o
=0.01–0.3 (being P
o
he sa u a ion p essu e).
Po e olume and ex e nal su ace a ea we e calcula ed by he -plo
me hod. The po e size dis ibu ions o mesopo es we e calcula ed om
he deso p ion b anch o he iso he m using he Ba e –Joyne –Halenda
(BJH) me hod.
The mog a ime ic Analysis (TGA) o powde samples was pe -
o med using a The mal Ad an age SDT-600 ins umen wi h a gene al
hea ing p o ile om 30 o 650 ◦C and using a hea ing a e o 5 ◦C/min
unde ai in a low o 100 mL/min.
2.5. De e mina ion o c i ical micelle concen a ion (CMC) o glycod ugs
The CMC o he s udied sp
2
-IGL compounds was de e mined by DLS.
Measu emen s we e ca ied ou in a glass cu e e a 25 ◦C and epea ed
h ee imes. A se ies o solu ions anging om 0.02 o 1.0 mM was
p epa ed in Milli-Q wa e om a me hanolic s ock solu ion o sp
2
-IGL
(10 mM). The in ensi y alues o sca e ed ligh as a unc ion o con-
cen a ion o he glycomime ics we e depic ed (see ESM o de ails).
The sca e ing in ensi ies de ec ed o sp
2
-IGL concen a ions below
CMC ga e an app oxima ely cons an alue co esponding o ha o
wa e . The in ensi y s a ed o show a linea inc ease wi h concen a ion
a he CMC, since he numbe o micelles inc eased in he solu ion. The
in e sec ion o bes i lines d awn h ough he da a poin s co esponds
o he CMC alue. Fu he e idence o micelle o ma ion came om he
co ela ion unc ion cu es, whe e in e cep s o co ela ion unc ions
became much highe (>0.7) a e micelles o ma ion.
2.6. Compu a ional me hods
Tigh -Binding Densi y Func ional Theo y calcula ions we e ca ied
ou using he DFTB+( . 24.1) code [23], wi hin he GFN2-xTB Hamil-
onian [24], which is he i s pa ame ized igh -binding me hod o
include elec os a ic in e ac ions and exchange-co ela ion e ec s up o
second o de in he mul ipole expansion, as well as he D4 G imme
dispe sion model [25]. As a model o he ZIF-8 su ace we used he
(100) su ace, which is he mos s able. The su ace dipole was emo ed
by ans e ing wo imidazola e a oms om he op o he bo om o he
model su ace. The plana models o he micelles we e c ea ed using he
Packmol code [26].
Fo all sys ems s udied, in o de o accommoda e he eac i e unc-
ional g oups o he glycolipid molecules nea he eac ion si es, we i s
R. Rod íguez-Ma ín e al.
Ma e ials Today Chemis y 44 (2025) 102546
3
ca ied ou es ained Molecula Dynamics (MD) simula ions, using he
Plumed code [27], in oducing linea and ha monic es ain s on he
dis ance be ween he po en ially eac i e O a oms ( hose in he OH
g oups in sys em 1 and in he O-ace yl g oups in sys em 2). The
es aining ene gy (δE) is gi en by: δE=∑ijk
2(dij −a)2+m(dij −a),
whe e k=25 kJ/(mol⋅
˚
A2), m=25 kJ/(mol ⋅
˚
A), a=2.7˚
A, and d is he
dis ance be ween he eac i e O a om and he supe icial Zn a om. In
o de o acili a e molecula eassembling, he empe a u e was se o
450 K. The p essu e was 1 ba . In all MD simula ions he imes eps we e
se o 0.5 s, and Nose-Hoo e ba os a s (wi h a 10 s ime cons an ) and
he mos a s (wi h a 100 s ime cons an ) we e employed o ca y ou he
NPT MD simula ions. The simula ions we e un o 10 ps. The las
con igu a ions we e ene gy-minimised wi h RFO algo i hms. Once he
eac i e unc ional g oups we e close o he eac ion si es, we emo ed
he es ain s and pe o med NPT MD simula ions, o 100 ps, s a ing
om he ene gy-minimised s uc u es, a a p essu e o 1 ba and em-
pe a u e o 298 K.
3. Resul s and discussion
3.1. Syn hesis o ZIF-based nanos uc u es con aining glycod ugs
(GlycoZIFs)
Being ully awa e ha solubili y issues in in i o sys ems o he
a o emen ioned amphiphilic sp
2
-glycod ugs may diminish hei
ex ao dina y in insic he apeu ic ac i i y owa ds di e en pa hol-
ogies, we conside in his wo k he possibili y o expanding he ZIF-8-
based nano echnological app oach epo ed o compound 1. Ex end-
ing he me hodology o o he sp
2
-IGLs would allow us o imp o e he
in acellula deli e y o each o hese glycod ugs, and he eby maximize
hei he apeu ic bene i s. To explo e he scope o he encapsula ion
app oach, we selec ed ou sp
2
-IGLs as a ge candida es (1–4, Scheme
1A), being 1 he compound al eady used in ou p e ious wo k [19].
Since addi ional cha ac e iza ion o 1@ZIF ha e been pe o med in his
wo k, we ha e included i h oughou he manusc ip . F om he chem-
ical poin o iew, he
α
-glycomime ics examined in his s udy showcase
no able di e ences in hei s uc u al ea u es no only ega ding he
α
-glycosidic connec o - ype (S, SO
2
o SeC(NH)
2
), bu also in he glycone
co e due o he eplacemen o he hyd oxyl g oup loca ed in C2 posi ion
by a hyd ogen a om in he pipe idine esidue, compounds 1 and 2 s
2-deoxy-de i a i es 3 and 4 (Scheme 1A).
Once we p epa ed he selec ed sp
2
-IGLs, he co esponding Glyco-
ZIFs we e success ully syn hesized by ollowing a de no o o biomime ic
mine aliza ion encapsula ion app oach as p e iously epo ed o com-
pound 1 [19]; see he de ailed expe imen al p ocedu e in sec ion 2.2.
The as-p epa ed GlycoZIFs we e e med 1@ZIF, 2@ZIF, 3@ZIF and
4@ZIF, which s and o he pa icles con aining he sp
2
-IGLs 1–4. We did
no obse e isual changes in he encapsula ion p ocess wi h he
di e en glycolipids, de ec ing in all cases he g adual inc ease in
u bidi y o e ime as he GlycoZIF c ys als g ew. Fu he mo e, HPLC
analyses o he supe na an s a e pu i ica ion o GlycoZIFs con i med
he e icien encapsula ion o he glycod ugs in all cases, ob aining e y
simila alues o encapsula ion e iciencies (96–98 %) and loading ca-
paci ies (3–4 w %). Also, he e med ZIF-8 con ol 1 (ZIF-8/Cn 1) and
ZIF-8 con ol 2 (ZIF-8/Cn 2) we e p epa ed in absence o glycod ug o
compa ison. Fo ZIF-8/Cn 1, he syn hesis was pe o med employing he
same op imized expe imen al condi ions bu eplacing he co espond-
ing sp
2
-IGL by me hanol, o keep he amoun o me hanol cons an in he
inal eac ion mix u e. No e ha he glycod ug s ock solu ion was p e-
pa ed in me hanol o solubili y easons. In his case, la ge pa icles
we e ob ained due o he absence o he amphiphilic glycolipid ha ac s
as a modula o agen du ing he c ys al o ma ion. Howe e , he size o
he pa icles is decisi e in hei biological pe o mance, since i a ec s
he cellula up ake p ocess and in acellula s abili y, so i is desi able o
ha e con ol pa icles (wi hou loaded d ug) wi h a size simila o ha o
he he apeu ic nanosys em. In his line, ZIF-8/Cn 2 was also p epa ed,
whe e he sp
2
-IGL was eplaced by he su ac an CTAB as a size con-
olling agen , allowing he pa icle size o be con olled (<100 nm) so
ha i was simila o ha o GlycoZIFs. Nex , he esul ing GlycoZIFs and
con ol pa icles we e analyzed o de e mine hei physico-chemical
p ope ies using di e en echniques: DLS, TEM, PXRD, NMR, N
2
physiso p ion and TGA.
3.2. Mo phological and s uc u al cha ac e iza ion o GlycoZIFs
The hyd odynamic diame e (d
h
) o he GlycoZIFs pa icles, 1@ZIF,
2@ZIF, 3@ZIF and 4@ZIF, dispe sed ei he in MeOH (Fig. 1A) o Milli-Q
wa e (Fig. 1B) was measu ed by DLS analysis. I is wo hwhile no ing
ha he edispe sion o he GlycoZIFs in wa e did no signi ican ly
modi y he hyd odynamic size. The esul s (Table S1, ESM) e ealed ha
all GlycoZIFs, ega dless o bo h hei s uc u al di e ences and he
sol en employed, p esen ed e y simila hyd odynamic sizes (ca. 80
nm), and impo an ly, a he low polydispe si y index (PDI), which was
indica i e o a homogenous popula ion o pa icles. Compa ison o in-
ensi y, olume and numbe -weigh ed size dis ibu ions ob ained o he
di e en GlycoZIFs pa icles showed small di e ences as expec ed due
o he na ow size dis ibu ions (Fig. S4). The su ace cha ge o hese
GlycoZIFs dispe sed in wa e and in a phospha e bu e (PB) solu ion
(0.01 M, pH =7.4) was also s udied by ζ-po en ial measu emen s
(Fig. 1C). The alues o ζ-po en ial o he GlycoZIFs dispe sed in wa e
we e ca. 10 mV, while GlycoZIFs dispe sed in a PB solu ion (0.01 M, pH
=7.4) exhibi ed nega i e cha ge, ca. −30 mV, likely due o he coo -
dina ion o he HPO
4
2−
o he Zn
2+
in he GlycoZIF su ace. No signi ican
changes in he su ace cha ge o GlycoZIFs compa ed o he con ol
nanosized ZIF-8 pa icles (ZIF-8/Cn 2) in any o he es ed media
con i med ha glycod ug molecules we e indeed encapsula ed wi hin
he ZIF-8 s uc u e and no adso bed on he su ace o he pa icles.
In o de o check possible di e ences in he mo phology (shape and
size) and he homogenei y o he GlycoZIF nanopa icles depending on
he sp
2
-IGL encapsula ed, he pa icles we e examined unde he mi-
c oscope. Rep esen a i e TEM images o 1@ZIF, 2@ZIF, 3@ZIF, 4@ZIF
and he con ols (ZIF-8/Cn 1 and ZIF-8/Cn 2) a e shown in Fig. 2. These
esul s e ealed ha he sp
2
-IGLs molecules we e inco po a ed o ming
micelles which a e loca ed oughly in he cen e o he s uc u e. This
ac seems o indica e ha , unde he op imized expe imen al condi-
ions, he micelles p esen in he medium du ing he syn hesis (i.e.,
aqueous mix u e con aining he p ecu so s) ac as seeds o he subse-
quen o ma ion o a ZIF-8 shell a ound hem. No ably, small di e ences
in he s uc u al ea u es o he sp
2
-IGLs led o some changes in he inal
mo phology o he GlycoZIFs pa icles. In his ega d, some GlycoZIFs
had a cubic mo phology wi h ounded co ne s (1@ZIF, 2@ZIF), while
o he s p esen ed a quasi-sphe ical shape (3@ZIF, 4@ZIF). Con ol ZIF-
8/Cn 1 pa icles showed he ypical dodecahed al shape, while he
con ol ZIF-8/Cn 2 p esen ed a cubic shape, as expec ed when using
CTAB as su ac an agen [19]. This inding is no su p ising since p e-
iously desc ibed esul s ha e al eady shown ha di e en mo phol-
ogies can be achie ed by using di e en modula o s agen s (su ac an s
o o ganic amines) o by a ying he concen a ion o hese modula o s
in he mo he solu ion [28].
Nex , he c ys allini y o he GlycoZIFs was analyzed by PXRD
(Fig. 3), con i ming he cha ac e is ic ZIF-8 single-phase sodali e o-
pology c ys allini y o all he GlycoZIFs ega dless o he s uc u al
di e ences o he encapsula ed sp
2
-IGL. As obse ed, all he di ac ion
peaks i well wi h he simula ed ZIF-8 and wi h bo h ZIF-8 con ols,
which e eal ha he encapsula ion o sp
2
-IGL micelles wi hin he
s uc u e did no a ec signi ican ly he c ys allini y o he ZIF-8 shell
g own a ound hem. Howe e , a sligh b oadening o some di ac ion
peaks in all GlycoZIFs was also e iden . This ac could be ela ed o
some s uc u al de ec s wi hin he nanos uc u e as esul o he inco -
po a ion o he glycomime ics, as well as due o he smalle nanopa icle
size o he GlycoZIFs (d
h
~ 75–89 nm) compa ed o ZIF-8/Cn 1 (d
h
~
R. Rod íguez-Ma ín e al.
Ma e ials Today Chemis y 44 (2025) 102546
4
509–515 nm) and ZIF-8/Cn 2 (d
h
~ 103–110 nm) (Table S1).
Likewise, i espec i e o ei he he unc ionali y a he glycosidic
linkage o he p esence/absence o he hyd oxyl g oup loca ed in C2 o
he glycone moie y,
1
H NMR analyses allowed us o co obo a e ha
hese
α
-glycomime ics we e no adso bed on he su ace o he
nanopa icles bu encapsula ed inside he ZIF-8 amewo k, as p e i-
ously epo ed o he hyb id 1@ZIF [19]. To his end,
1
H NMR spec a
o compounds 2, 3 and 4, dissol ed in CD
3
OD, and hei co esponding
GlycoZIFs (2@ZIF, 3@ZIF and 4@ZIF) dispe sed in CD
3
OD, we e
eco ded a 400 MHz and compa ed o hose
1
H NMR spec a ob ained
Fig. 1. DLS numbe dis ibu ions o d
h
o GlycoZIFs and con ol ZIF-8 pa icles as dispe sed in (A) MeOH o (B) Milli-Q wa e . (C) ζ-po en ial o GlycoZIFs and
con ol pa icles dispe sed in ei he wa e o PB (0.01 M, pH =7.4).
R. Rod íguez-Ma ín e al.
Ma e ials Today Chemis y 44 (2025) 102546
5

a e dissol ing he GlycoZIF-based nanos uc u es unde he p esence
o dilu ed sul u ic acid. The same p o ocol was ollowed wi h
ZIF-8/Cn 1. Be o e he acid dissolu ion o he pa icles,
1
H NMR spec a
o all he GlycoZIFs showed wo signals co esponding o he p o ons o
HmIM and no signals a ibu able o he p o ons o ei he he glycone
co e o he alipha ic linea chain. This esul ag ees wi h he inco po-
a ion o hese glycomime ics wi hin he igid and solid ZIF-8 shell,
being hei esonance p e en ed when a magne ic ield is applied.
Howe e , when 2@ZIF, 3@ZIF and 4@ZIF nanos uc u es we e dis-
sol ed, due o he b eaking o Zn–N bonds unde acid expe imen al
condi ions, ep esen a i e signals o p o ons belonging o he eleased
sp
2
-IGLs we e iden i ied. As a ep esen a i e example,
1
H NMR analyses
o 2@ZIF a e depic ed in Fig. 4.
1
H NMR spec a o 3@ZIF, 4@ZIF and
ZIF-8/Cn 1 a e shown in he ESM (Figs. S5–S8). These esul s o all he
sp
2
-IGLs unde s udy clea ly e eal hei success ul encapsula ion in o
he ZIF-8 c ys alline s uc u e.
To e alua e he e ec on he po osi y o ZIF-8 a e he encapsula ion
o 1, 2, 3 and 4, N
2
so p ion iso he ms o he GlycoZIFs we e measu ed
(Fig. 5). Whe eas ZIF-8/Cn 1 and ZIF-8/Cn 2 pa icles p esen ed a
e e sible ype I iso he m, ypical o mic opo ous ma e ials, GlycoZIFs
displayed ype I/ ype IV iso he ms wi h a hys e esis loop a high ela i e
p essu es, sugges ing he p esence o mesopo ous. The B u-
naue −Emme −Telle (BET) appa en su ace a ea (S
BET
) dec eased
no ably in GlycoZIFs (Table S2), which is a ibu ed o he inco po a ion
o sp
2
-IGLs wi hin he s uc u e. Anyway, all he GlycoZIFs showed e y
simila ex u al p ope ies (mic opo e a ea (S
mic o
), ex e nal su ace a ea
(S
ex
), mic opo e olume (V
mic o
) and mesopo e olume (V
meso
), see
Table S2 o de ails), con i ming again he simila beha iou o he
di e en s udied glycolipids. The signi ican dec ease in he mic opo e
a ea accompanied wi h he no able inc ease o ex e nal su ace a ea may
be a ibu ed o he p esence o glyco-micelles inside he amewo k.
No e ha he inclusion o d ugs as indi idual compounds (no o ming
assemblies o micelles) does no usually lead o such a la ge inc ease in
he ex e nal su ace a ea. BJH po e size dis ibu ions cu e o GlycoZIFs
(Fig. S9 and Table S2) showed ha mesopo ous we e p esen wi hin he
s uc u e. The e o e, hese esul s seem o indica e ha he sp
2
-IGLs
we e encapsula ed in o ZIF-8 in he o m o micelles, consis en wi h
TEM obse a ions, and he eby p oduced some mesopo osi y while
p ese ing he mic opo osi y o ZIF-s uc u e o a la ge ex en .
Nex , he he mal beha iou o he GlycoZIFs was also e alua ed
(Fig. S10). The TGA cu e o con ol ZIF-8/Cn 1 pa icles ma ched well
wi h he epo ed li e a u e [29], wi h a sha p weigh loss a a ound
440 ◦C ha co esponds o he ans o ma ion om ZIF-8 in o ZnO.
No ably, he encapsula ion o sp
2
-IGLs led o changes in TGA p o iles o
he co esponding GlycoZIFs, showing an ea ly mass loss a ~300 ◦C,
which could be a ibu ed o he decomposi ion o sp
2
-IGLs molecules
encapsula ed wi hin he ZIF-s uc u e.
Finally, he elease o glycod ugs om he co esponding GlycoZIFs
was s udied unde wo biological condi ions, i.e., ex acellula and
in acellula en i onmen s, which di e in he pH o he su ounding
media. To do his, he GlycoZIFs we e incuba ed o 24 h in ei he T is
bu e solu ion a pH =7.4 (emula ing ex acellula condi ions) o in
ace a e bu e solu ion pH =4.5 (emula ing condi ions inside he
endosomes), and we quan i ied he amoun o glycod ug (1, 2, 3 o 4)
Fig. 2. Rep esen a i e TEM images o GlycoZIFs: 1@ZIF, 2@ZIF, 3@ZIF, 4@ZIF, and con ol pa icles: ZIF-8/Cn 1 and ZIF-8/Cn 2. No e ha in some cases o mo e
clea ly obse e he micelle inside he pa icle i is necessa y o ake he image ou o ocus.
R. Rod íguez-Ma ín e al.
Ma e ials Today Chemis y 44 (2025) 102546
6
deli e ed o he medium by HPLC. As shown in Fig. S11, he e was a
success ul elease a pH =4.5 o all GlycoZIFs, eaching be ween 74 and
79 % a e 24 h, while he amoun o glycod ug eleased was minimal
(<10 %) a pH =7.4. These esul s we e expec ed due o he pH-
dependan s abili y o he ZIF-8, as he Zn–N coo dina ion bonds a e
b oken a acidic pH, esul ing in he dissolu ion o he pa icles and
subsequen elease o he encapsula ed ca go. Taking ad an age o his
pH- esponsi eness o he GlycoZIFs, we could achie e a con olled
in acellula deli e y o he a ge glycod ugs, sol ing hei solubili y
limi a ions and inc easing he amoun o glycod ug eaching he in e io
o cells, which is an icipa ed o esul in be e he apeu ic e iciency.
3.3. Mechanis ic hypo hesis o he o ma ion o GlycoZIFs
All he abo e cha ac e iza ion esul s oge he demons a e ha he
s udied sp
2
-IGLs 1–4 p esen an analogous beha iou wi h ega d o
hei inco po a ion in o he ZIF-8 s uc u e du ing c ys al o ma ion,
also gi ing ise o GlycoZIFs wi h e y simila physical-chemical p op-
e ies. On his basis, we could in e ed ha he common sp
2
-iminosuga
pola head and he hyd ophobic alkyl chain a e key s uc u al mo i s
ha allow he success ul p epa a ion o GlycoZIFs’ s uc u es. No ably,
he na u e o he
α
-glycosidic connec o o he lack o he –OH g oup
loca ed in C2 posi ion o he glycone co e we e ound o be i ele an o
he GlycoZIFs o ma ion. Based on he expe imen al esul s achie ed so
a , we aimed o disclose he molecula mechanism in ol ed in he
nuclea ion and g ow h s ages du ing he o ma ion o GlycoZIFs pa i-
cles. We obse ed ha he concen a ion o he glycolipid was a key
ac o o achie ing hei p ope encapsula ion [19], which seems o be
associa ed o he p esence/absence o glycolipid micelles in he eac ion
mix u e. Low glycolipid concen a ions (<0.2 mM) did no lead o he
o ma ion o GlycoZIFs, bu ZIF-8 pa icles we e ob ained in which,
cu iously, changes in size and mo phology we e obse ed when
compa ed wi h he con ol ZIF-8 sample (ZIF-8/Cn 1, p epa ed in he
absence o glycolipid). This inding indica ed ha glycolipid is capable
Fig. 3. PXRD pa e ns o 1@ZIF, 2@ZIF, 3@ZIF, 4@ZIF and con ol pa icles (ZIF-8/Cn 1, ZIF-8/Cn 2). Magni ica ions o he 2θ ange o clea ly isualize some
b oadened peaks in he GlycoZIFs pa e ns a e p esen ed as inse s. Simula ion o ZIF-8 (C ys allog aphy Open Da abase: 7111970) wi h hkl planes co esponding o
each peak is also shown.
R. Rod íguez-Ma ín e al.
Ma e ials Today Chemis y 44 (2025) 102546
7
o ac ing as a size/shape-con olling agen , jus as epo ed o o he
su ac an molecules such as CTAB. In con as , when he glycolipid was
added o he eac ion media a a inal concen a ion o 0.9 mM, a which
he compound is mos ly as micelles, we ob ained GlycoZIFs pa icles as
hose p esen ed along he wo k, inco po a ing he glycolipid wi h a
good encapsula ion e iciency and showing he p esence o one
glyco-micelle pe ZIF-pa icle as obse ed unde he mic ocoscope. A
such concen a ion, he glycolipids would be mos ly as micelles in he
media, H
2
O:MeOH (10:1), acco ding o CMC es ima ed om DLS mea-
su emen s (discussed la e ). These esul s poin ou ha he
glyco-micelles igge he spon aneous o ma ion o ZIF-8 shell, likely
ac ing as nuclea ion seeds in a simila way o wha was epo ed wi h
ino ganic nanopa icles (e.g., Au NPs and Pd NPs) in he o ma ion o
co e-shell NP/ZIF-8 composi es [30,31]. The e o e, we hypo hesize ha
he mechanism begins wi h he as o ma ion o micelles when he
glycolipid is added o he eac ion mix u e con aining he ZIF-8
Fig. 4.
1
H NMR spec a (400 MHz, CD
3
OD) o : (a) 2@ZIF, (b) dissol ed 2@ZIF, (c) ee sp
2
-IGL 2 bea ing a sul onyl g oup as glycosidic linkage.
R. Rod íguez-Ma ín e al.
Ma e ials Today Chemis y 44 (2025) 102546
8
p ecu so s. As depic ed in Fig. 6, Zn
+2
ions a e concen a ed o he
glyco-micelle su ace due o Zn–OH coo dina ing bonds, p oducing a
local supe sa u a ion ha a o s ZIF-8 c ys al g ow h a ound hose
micelles. As a esul , GlycoZIFs c ys alline nanopa icles a e o med in
jus a ew minu es, isually obse able by he appea ance o sligh
u bidi y ins an ly a e he addi ion o any o he glycolipids, whe eas
he pa icles size inc eases u he wi h ime un il eaching he
maximum size a e 2 h, acco ding o p e ious expe imen al s udies
[19].
To ob ain some expe imen al e idence ha suppo s he p oposed
mechanis ic hypo hesis, we conduc ed he ollowing di e en expe i-
men s. Fi s , o de e mine i sp
2
-IGLs we e able o o m micelles as
p oposed in he eac ion media, we add essed he de e mina ion o CMC
alues o 1, 2, 3 and 4 using a me hod based on DLS measu emen s (see
ESM, Table S3). Acco ding o he esul s, we could hus con i m ha a
he concen a ions used in he syn hesis o he GlycoZIFs, sp
2
-IGLs
Fig. 5. N
2
adso p ion ( illed ci cles) and deso p ion (emp y ci cles) iso he ms o he as-p epa ed GlycoZIFs and con ol ZIF-8 pa icles.
Fig. 6. P oposed mechanism o he o ma ion o GlycoZIFs pa icles, showing he ole o he glyco-micelles as nuclea ion seeds o p omo e he g ow h o he ZIF-8
shell a ound.
R. Rod íguez-Ma ín e al.
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9