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Model of risk of exposure to Lyme borreliosis and tick-borne encephalitis virus- Infected ticks in the border area of the Czech Republic (South Bohemia) and Germany (Lower Bavaria and Upper Palatinate)

Abstract

In Europe, Lyme borreliosis (LB) and tick-borne encephalitis (TBE) are the two vector-borne diseases with the largest impact on human health. Based on data on the density of host-seeking Ixodes ricinus ticks and pathogen prevalence and using a variety of environmental data, we have created an acarological risk model for a region where both diseases are endemic (Czech RepublicSouth Bohemia and GermanyLower Bavaria, Upper Palatinate). The data on tick density were acquired by flagging 50 sampling sites three times in a single season. Prevalence of the causative agents of LB and TBE was determined. Data on environmental variables (e.g., altitude, vegetation cover, NDVI, land surface temperature) were obtained from various sources and processed using geographical information systems. Generalized linear models were used to estimate tick density, probability of tick infection, and density of infected ticks for the whole area. A significantly higher incidence of human TBE cases was recorded in South Bohemia compared to Bavarian regions, which correlated with a lower tick density in Bavaria. However, the differences in pathogen prevalence rates were not significant. The model outputs were made available to the public in the form of risk maps, indicating the distribution of tick-borne disease risk in space.

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Model of risk of exposure to Lyme borreliosis and tick-borne encephalitis virus- Infected ticks in the border area of the Czech Republic (South Bohemia) and Germany (Lower Bavaria and Upper Palatinate)

Author: Hönig, Václav
Publisher: MDPI
Year: 2019
DOI: 10.3390/ijerph16071173
Source: https://dspace.vsb.cz/bitstreams/7627f30f-42a0-48ba-934f-bbca2c2470e3/download
In e na ional Jou nal o
En i onmen al Resea ch
and Public Heal h
A icle
Model o Risk o Exposu e o Lyme Bo eliosis and
Tick-Bo ne Encephali is Vi us-In ec ed Ticks in he
Bo de A ea o he Czech Republic (Sou h Bohemia)
and Ge many (Lowe Ba a ia and Uppe Pala ina e)
Václa Hönig 1,2,3,* , Pa el Š ec 4, Lukáš Ma ek 5, Tomáš M k iˇcka 6, Zub iko áDana 7,8 ,
Ma ia (Vöge l) Wi mann 7, Ondˇ ej Masaˇ 4, Daniela Sz u co á4, Daniel R ˚užek 1,2,3 ,
Ku P is e 7and Libo G ubho e 1,2
1Ins i u e o Pa asi ology, Biology Cen e, Academy o Sciences o Czech Republic, B aniso ska 31,
370 05 Ceske Budejo ice, Czech Republic; [email p o ec ed] (D.R.); libo [email p o ec ed] (L.G.)
2Facul y o Science, Uni e si y o Sou h Bohemia, B aniso ska 31, 370 05 Ceske Budejo ice, Czech Republic
3Ve e ina y Resea ch Ins i u e, Hudco a 296, 621 00 B no, Czech Republic
4Depa men o Geoin o ma ics, VSB—Technical Uni e si y o Os a a, 17. lis opadu 15, 708 00 Os a a,
Czech Republic; [email p o ec ed] (P.S.); [email p o ec ed] (O.M.); daniela.sz u [email p o ec ed] (D.S.)
5GeoHeal h Labo a o y, Geospa ial Resea ch Ins i u e, Uni e si y o Can e bu y, P i a e Bag 4800,
Ch is chu ch 8140, New Zealand; lukas.ma ek@can e bu y.ac.nz
6Facul y o Economics, Uni e si y o Sou h Bohemia, S uden ska 13, 370 05 Ceske Budejo ice, Czech
Republic; [email p o ec ed]
7Ins i u e o Compa a i e T opical Medicine and Pa asi ology, Ludwig-Maximilians-Uni e si ä München,
Leopolds . 5, 80802 Munich, Ge many; [email p o ec ed] (Z.D.); [email p o ec ed] (M.(V.)W.);
[email p o ec ed] (K.P.)
8Ins i u e o Pa asi ology, Slo ak Academy o Sciences, Hlinko a 3, 040 01 Kosice, Slo akia
*Co espondence: honig@pa u.cas.cz
Recei ed: 22 Feb ua y 2019; Accep ed: 26 Ma ch 2019; Published: 2 Ap il 2019


Abs ac :
In Eu ope, Lyme bo eliosis (LB) and ick-bo ne encephali is (TBE) a e he wo ec o -bo ne
diseases wi h he la ges impac on human heal h. Based on da a on he densi y o hos -seeking
Ixodes icinus icks and pa hogen p e alence and using a a ie y o en i onmen al da a, we ha e c ea ed
an aca ological isk model o a egion whe e bo h diseases a e endemic (Czech Republic—Sou h
Bohemia and Ge many—Lowe Ba a ia, Uppe Pala ina e). The da a on ick densi y we e acqui ed
by lagging 50 sampling si es h ee imes in a single season. P e alence o he causa i e agen s o LB
and TBE was de e mined. Da a on en i onmen al a iables (e.g., al i ude, ege a ion co e , NDVI,
land su ace empe a u e) we e ob ained om a ious sou ces and p ocessed using geog aphical
in o ma ion sys ems. Gene alized linea models we e used o es ima e ick densi y, p obabili y o
ick in ec ion, and densi y o in ec ed icks o he whole a ea. A signi ican ly highe incidence o
human TBE cases was eco ded in Sou h Bohemia compa ed o Ba a ian egions, which co ela ed
wi h a lowe ick densi y in Ba a ia. Howe e , he di e ences in pa hogen p e alence a es we e no
signi ican . The model ou pu s we e made a ailable o he public in he o m o isk maps, indica ing
he dis ibu ion o ick-bo ne disease isk in space.
Keywo ds:
ick; Lyme bo eliosis; ick-bo ne encephali is; Ixodes icinus; isk modeling; geog aphical
in o ma ion sys ems
In . J. En i on. Res. Public Heal h 2019,16, 1173; doi:10.3390/ije ph16071173 www.mdpi.com/jou nal/ije ph
In . J. En i on. Res. Public Heal h 2019,16, 1173 2 o 17
1. In oduc ion
Vec o -bo ne diseases ep esen a se ious heal h isk o human and animals in many pa s o he
wo ld. In Eu ope, pa hogens ansmi ed by Ixodes icinus (I. icinus) icks, namely agen s o Lyme
bo eliosis (LB) and ick-bo ne encephali is (TBE), a e he mos widesp ead ec o -bo ne diseases
o human [
1
,
2
]. To be able o ake app op ia e measu es o limi he le el o exposu e o human
popula ions o ec o -bo ne pa hogens, de ailed knowledge o he dis ibu ion o he isk o in ec ion
in space and ime is needed.
Lyme bo eliosis is caused by spi oche es o he Bo elia bu gdo e i sensu la o complex
(Spi ochae ales,Spi ochae aceae) and TBE by he ick-bo ne encephali is i us (Fla i i us,Fla i i idae).
Bo h he diseases a e zoonoses main ained in geog aphically mo e o less speci ied a eas in na u e,
called “na u al oci”. Humans a e acciden al, p edominan ly dead-end hos s, which ge in ec ed when
en e ing he na u al ocus. In hese oci, causa i e agen s o ec o -bo ne diseases a e main ained by
ci cula ion be ween a h opod ec o s and ansmission compe en hos s. The e o e, he epidemiology
o hese in ec ions is in luenced no only by he in insic ea u es o he pa hogen, bu also by he
beha io and ecology o i s ec o s and hos s. Mo eo e , all h ee componen s o ec o -bo ne pa hogen
na u al cycles a e in luenced by nume ous en i onmen al ac o s o abio ic ( empe a u e, ai humidi y,
access o sunligh , al i ude e c.) [
3
–
6
] o bio ic (na u al hos a ailabili y, ansmission compe ence o
he hos , ec o -hos con ac a e, hos immuni y e c.) [
7
–
9
] na u e. Because he en i onmen in luences
all h ee componen s o he na u al ci cula ion, en i onmen al a iables may be used o he p edic ion
o isk o in ec ion o humans en e ing ce ain a eas [10,11].
The exis ing models o ick-bo ne pa hogens c ea ed o ecological o epidemiological pu poses
a e usually based on he es ima ion o hos -seeking ick densi y and/o pa hogen p e alence in he ield,
collec ion o di e en en i onmen al da a, and use o a ious s a is ical app oaches (mul iple linea
eg ession, classi ica ion and eg ession ees, gene alized linea models e c.) in o de o ind a
ma hema ical exp ession o he ela ionship be ween he en i onmen al a iables and cha ac e is ics
o ick and pa hogen dis ibu ion [6,12–17].
The main aim o his s udy was o use a se o ick abundance and pa hogen p e alence da a o
p epa e summa ized, easy o access in o ma ion on he isk o in ec ion by ick-bo ne diseases o
he gene al public. Based on he esul s o an ex ensi e ield sampling and labo a o y analysis o he
ick popula ions [
18
,
19
], we ha e de eloped a model o he p edic ion o he densi y o hos -seeking
I. icinus icks, LB spi oche e and TBEV p e alence, and densi y o LB spi oche e/TBEV-in ec ed icks
using commonly a ailable en i onmen al da a. Using ools o geog aphic in o ma ion sys ems (GIS),
we ha e in eg a ed he esul s o he esea ch, including he isk models, in map ou pu s which ha e
been made a ailable o he public h ough an in e ac i e in e ne -based map po al.
2. Ma e ials and Me hods
2.1. S udy Si es
The da a on he dis ibu ion o I. icinus ick densi y, and TBEV and B. bu gdo e i s.l. p e alence
in icks we e collec ed in he Czech-Ge man bo de land in 2010–2011. Reco ds o e ospec i e LB
and TBE human disease case incidence we e ob ained o he same a ea o he pe iod 2001–2009.
The s udy a ea consis ed o he egion o Sou h Bohemia in he Czech Republic and he egions o
Lowe Ba a ia and Uppe Pala ina e o he Ge man F ee S a e o Ba a ia (Figu e 1). Geog aphically,
clima ically, and biologically, he a ea is conside ably he e ogeneous anging om Danube Valley a
he Ge man-Aus ian bo de o he highes sec ions o Šuma a (Bohemian Fo es ) and Ba a ian Fo es
moun ain ange (280–1450 m a.s.l.). The o al a ea unde su ey comp ised 30,077 km
2
(10,056 km
2
in he Czech Republic and 20,021 km
2
in Ge many). The egions o Sou h Bohemia and Ba a ia a e
ecognized as a eas o endemic occu ence o LB and TBE [20,21].
In . J. En i on. Res. Public Heal h 2019,16, 1173 3 o 17
Figu e 1.
Su eyed a ea o Sou h Bohemia (Czech Republic), Lowe Ba a ia and Uppe Pala ina e
(Ba a ia, Ge many); Lowe Ba a ia—Niede baye n, Uppe Pala ina e (Obe p alz), Baye n—Ba a ia;
localiza ion o ick sampling si es indica ed by a c oss sign.
The aca ological isk o ick-bo ne disease in ec ion is de e mined by he p e alence o he pa hogen
in icks and abundance o he ick popula ion. P e ious s udies ha e shown ha bo h he pa ame e s may
be p edic ed based on hei known ela ionship o ce ain en i onmen al ac o s [
6
,
10
,
22
,
23
]. The e o e,
in he ield, in a ne wo k o 50 s udy si es sp ead h oughou he s udy a ea, we ha e collec ed da a on
he densi y o hos -seeking I. icinus,B. bu gdo e i s.l., and TBEV p e alence. In pa allel, a la ge da ase
o en i onmen al da a was es ablished and subsequen ly used o gene a e p edic ions o hos -seeking
ick densi y and pa hogen p e alence o e e y pixel o he s udy a ea.
2.2. Field S udy
The dis ibu ion o icks and ick-bo ne pa hogens was es ima ed in a ne wo k o 50 s udy si es
(30 in Sou h Bohemia, 20 in Ba a ia—Lowe Ba a ia and Uppe Pala ina e) (Figu e 1), as desc ibed
in [
18
]. The densi y o hos -seeking I. icinus icks was es ima ed by “ lagging” each sampling si e
(600 m
2
pe si e and sampling e en ) h ee imes pe yea (May, June/July, Sep embe /Oc obe ),
esul ing in 150 sepa a e en ies ( o de ails, please see [
18
]). Only nymphal and adul I. icinus icks
we e sampled, as he densi y o la al icks is di icul o es ima e due o hei highly agg ega ed
dis ibu ion, hey a ely in es humans [24], and hey gene ally ha e a low pa hogen p e alence [25].
Collec ed icks we e anspo ed o he labo a o y and es ed o he p esence o DNA o
B. bu gdo e i and TBEV RNA using con en ional PCR o bo elia [
26
,
27
], e e se ansc ip ion
ollowed by con en ional PCR o TBEV (samples om Sou h Bohemia) [
28
], and e e se ansc ip ion
ollowed by eal- ime PCR (samples om Ba a ia) [
29
] ( o mo e de ailed in o ma ion see [
18
] and [
19
]).
The da a o bo h coun ies we e analyzed as a single da ase . Al oge he , da a om 15,150 and 28,862
icks we e a ailable conside ing B. bu gdo e i s.l. and TBEV in ec ion s a us, espec i ely.
2.3. En i onmen al Da a
Apa om he da a on ick and pa hogen dis ibu ion, we ha e used a ious sou ces o collec
epidemiological (numbe s o disease cases), demog aphic (numbe s o inhabi an s), and en i onmen al
da a (al i ude, slope, exposi ion, ege a ion co e , empe a u e e c.). The ypes o da a and hei
espec i e sou ces a e summa ized in Table 1. Sa elli e images acqui ed by he MODIS ins umen
we e used as a sou ce o land su ace empe a u e (LST) and ege a ion co e in o ma ion—no malized
di e ence ege a ion index (NDVI). F om he NASA Land P ocesses Dis ibu ed Ac i e A chi e Cen e ,
In . J. En i on. Res. Public Heal h 2019,16, 1173 4 o 17
he ollowing p oduc s we e downloaded o he whole a ea unde su ey: Su ace Tempe a u e
& Emissi i y 8-Day L3 Global, MOD11A2, and Vege a ion Indices 16-Day L3 Global MOD13Q1.
Indi idual measu emen s we e ex ac ed o he sampling locali ies and speci ied da es.
Table 1. En i onmen al and o he accesso y da a used o model cons uc ion and es ing *.
Type o Da a Da a Desc ip ion Sou ce Czech Rep. Sou ce Ba a ia
Epidemiological numbe LB cases disease cases pe
municipali y
Na ional Ins i u e o
Public Heal h, P ague RKI, Be lin; local public
heal h au ho i ies
numbe TBE cases
Demog aphic numbe o inhabi an s numbe o inhabi an s
pe municipali y Czech S a is ical O ice Fede al S a is ical O ice
Ge many
Physical-geog aphical
al i ude
digi al ele a ion model A cCR500, A cDATA,
P ague
Vek o 500, ATKIS®
Basis DLM, Baye ische
Ve messungs e wal ung
slope
exposi ion
Clima ic
land su ace empe a u e
(LST)
MODIS Land Su ace
Tempe a u e, 1000 m
as e
NASA, LP DAAC NASA, LP DAAC
Vege a ion co e NDVI MODIS NDVI, 250 m
as e NASA, LP DAAC NASA, LP DAAC
o es ype
CORINE landco e 2006,
100 m as e EEA EEA
* LB—Lyme bo eliosis; TBE— ick-bo ne encephali is; NDVI—no malized di e ence ege a ion index; RKI—Robe
Koch Ins i u e; NASA, LP DAAC—Na ional Ae onau ics and Space Adminis a ion, Land P ocesses Dis ibu ed
Ac i e A chi e Cen e ; EEA—Eu opean En i onmen Agency.
Using GIS, he da a we e ex ac ed and op imized o en e he analysis. Wi h ega d o di e ences
in he esolu ion o he sou ce da a, we ha e wo ked wi h an op imized esolu ion o he whole da ase
o a 250 m pixel size. Minimum, maximum, mean seasonal (May–Sep embe ), and mean annual LST
and NDVI alues we e calcula ed o indi idual sampling si es. In he case o physical geog aphical
cha ac e is ics and o es ype, a bu e a ea a ound he collec ion si e was aken in o accoun (pixel
o collec ion si e and eigh su ounding pixels). The cha ac e is ics we e exp essed as he p opo ion
o he a ea o a gi en quali y (e.g., co e ed by deciduous o es s). The densi y o hos -seeking icks
was exp essed as he numbe o icks pe 100 m
2
, and p e alence as po ion o samples posi i e o LB
spi oche es o TBEV o o al samples es ed.
Epidemiological da a we e ob ained (Na ional Ins i u e o Public Heal h, Czech Republic; Robe
Koch Ins i u e and local public heal h au ho i ies, Ge many) as numbe s o human disease cases
egis e ed be ween 2001–2009 in each o he 626 municipali ies in Sou h Bohemia and 536 in he
selec ed egions o Ba a ia. Da a on TBE and LB we e a ailable o Sou h Bohemia, whe e bo h
diseases a e epo ed manda o y. In he case o Lowe Ba a ia and Uppe Pala ina e, only da a on TBE
could be ga he ed. Census o popula ion and housing da a we e used as he sou ce o numbe s o
inhabi an s. Disease incidence was exp essed as he numbe o cases pe 100,000 inhabi an s.
2.4. Model Cons uc ion
Independen models we e c ea ed o he p edic ion o he densi y o hos -seeking icks (nymphal
and adul I. icinus), and p obabili y o in ec ion o a ick by LB spi oche es and TBEV. Subsequen ly,
he ick densi y model was combined wi h ei he he LB spi oche es o TBEV in ec ion p obabili y
model, gi ing a p edic ion o he densi y o in ec ed icks as a measu e o isk o in ec ion o an
un accina ed pe son en e ing a pa icula geog aphical a ea.
Fi s , he co ela ion o all po en ial explana o y a iables was examined by he Spea man
anking es , and c oss-co ela ions among he a iables we e inspec ed. Signi ican ly c oss-co ela ed
explana o y a iables we e g ouped oge he . Subsequen ly, he se o po en ial explana o y a iables
was es ed o co ela ion wi h he dependen a iables. F om each g oup o c oss-co ela ed
explana o y a iables, one ep esen a i e wi h he highes co ela ion coe icien wi h he dependen
a iable was chosen o u he analysis.
Gene alized linea models we e used o hos -seeking ick densi y p edic ion. Wi h ega d o
he cha ac e o he da a, a log-linea model wi h a Poisson dis ibu ion (Poisson eg ession model)
In . J. En i on. Res. Public Heal h 2019,16, 1173 5 o 17
was applied. Indi idual explana o y a iables we e e alua ed based on a Likely-hood ype 3 es .
The quali y o he model was e alua ed using McFadden’s pseudo R2.
In he case o he p edic ion o B. bu gdo e i s.l. and TBEV in ec ion in icks, a logi model was
applied. The ela ionship o a bi a ia e dependen a iable ( ick in ec ed/ ick no in ec ed) wi h
po en ial explana o y a iables o he same da ase as in he case o hos -seeking ick densi y was
examined in he model. Fi s , all he candida e explana o y a iables we e included in he model
and subsequen ly, he a iables ha we e no s a is ically signi ican ly impo an we e excluded, as
is done using a backwa ds s epwise app oach. Indi idual a iables we e excluded based on he
compa ison o Wald s a is ics and (c oss-) co ela ion coe icien alues. BIC and AIC c i e ia we e
con olled, indica ing he pe o mance o he whole model. The pe o mance o he wo esul ing
in ec ion p obabili y models was e alua ed using ROC (Recei e Ope a ing Cha ac e is ic) analysis.
An ROC cu e e alua es he ela ionship be ween he sensi i i y ( ue posi i e ac ion) and speci ici y
( alse posi i e ac ion) o he model [
30
] and i is a sui able measu e o he bina y classi ica ion.
The common way o in e p e a ion o he ROC is quan i ying he ac ion o an a ea unde he ROC
cu e (AUC). Gene ally speaking, he highe he AUC, he be e he abili y o he model o classi y.
A meaning ul model should ha e an AUC highe han 0.5, which indica es ha i is be e han a
andom p edic o [31].
2.5. S a is ical and GIS analyses
S a is ical analyses we e pe o med using STATISTICA e . 9 (S a So CR, P ague, Czech
Republic) and R [
32
]. A non-pa ame ic Mann-Whi ney es was used o a compa ison o disease
incidence a es and hos -seeking ick densi ies, and a chi squa e es o a compa ison o he p e alence
a e (LB) o minimum in ec ion a e (TBEV). Di e ences wi h p< 0.05 we e conside ed s a is ically
signi ican . All GIS analyses we e pe o med and map ou pu s gene a ed using A cGIS 10.X (ESRI,
Redlands, USA). The p ojec ou pu s we e in eg a ed in a web-based map po al using A cGIS o
Se e (ESRI, Redlands, USA).
3. Resul s
3.1. Disease Incidence
In he pe iod o 2001–2009, al oge he , 1453 TBE cases we e egis e ed in Sou h Bohemia compa ed
o 417 cases epo ed in Lowe Ba a ia and Uppe Pala ina e. When exp essed as incidence, 231 TBE
cases pe /100,000 inhabi an s we e epo ed om he Sou h Bohemian egion compa ed o 18 cases om
Ba a ia. The di e ences we e ound o be s a is ically signi ican (Mann-Whi ney UTes , p< 0.0001).
3.2. Densi y o Hos -Seeking I. Ricinus Ticks and Pa hogen P e alence
All he analyses we e based on agg ega ed da a om Sou h Bohemia and Ba a ia, esul ing in
50 s udy si es, 150 indi idual sampling e en s, 15,150 I. icinus icks analyzed o he p esence o
B. bu gdo e i s.l., and 28,862 icks es ed o TBEV. The mean densi y o hos -seeking icks eached
30.1 nymphs/100 m
2
( ange 1.3–110.2), and 2.0 adul icks/100 m
2
(0–10.7). The mean densi y o all
hos -seeking icks and nymphal icks in Sou h Bohemian sampling si es eached signi ican ly highe
alues (37.4 icks/100 m
2
and 34.9 nymphs/100 m
2
) han he abundance o hos -seeking icks in
Ba a ian si es (24.5 icks/100 m
2
and 22.8 nymphs/100 m
2
) (Mann-Whi ney U es , p< 0.001). In he
case o adul icks, he di e ence was no s a is ically signi ican (2.3 adul icks/100 m
2
in Sou h
Bohemia and 1.7 adul s/100 m2in Ba a ia).
The o al p e alence o LB spi oche es eached 12.3% (1865 posi i e samples/15,150 es ed),
and he minimum in ec ion a e (MIR) (samples es ed in pools) o TBEV eached 0.30% (87/28,862).
Sligh ly highe p e alence a es o B. bu gdo e i we e obse ed in samples om Ba a ia, whe eas
highe MIRs o TBEV we e ound in Sou h Bohemian samples. The only s a is ically signi ican
di e ences (
χ2
es ; p< 0.01) we e ound be ween he Bo elia p e alence in adul icks, which was

In . J. En i on. Res. Public Heal h 2019,16, 1173 6 o 17
signi ican ly highe in samples om Ba a ian locali ies (Tables 2and 3). Ticks posi i e o DNA o
B. bu gdo e i s.l. we e ound a each o he 50 s udy si es. A leas one TBEV posi i e ick was sampled
a 21 o 30 (70%) locali ies in Sou h Bohemia and a 7 o 20 (35%) s udy si es loca ed in Ba a ia.
Table 2. P e alence o Bo elia bu gdo e i s.l. in ield-collec ed Ixodes icinus icks.
Tick S age Nymphs Adul s To al
Posi i e/Tes ed P e alence Posi i e/Tes ed P e alence Posi i e/Tes ed P e alence
S. Bohemia 1239/9809 12.63% 117/1373 8.52% * 1356/11,182 12.13%
Ba a ia 458/3599 12.73% 51/369 13.82% * 509/3968 12.83%
To al 1697/13,408 12.66% 168/1742 9.64% 1865/15,150 12.31%
S a is ically signi ican di e ences (p< 0.05) a e indica ed by *.
Table 3. Minimum in ec ion a e o TBEV in ield-collec ed Ixodes icinus icks.
Tick De elopmen al
S age Nymphs Adul s To al
Posi i e/Tes ed MIR Posi i e/Tes ed MIR Posi i e/Tes ed MIR
S. Bohemia 54/18,829 0.29% 10/1228 0.81% 64/20,057 0.32%
Ba a ia 20/8203 0.24% 3/602 0.50% 23/8805 0.26%
To al 74/27,032 0.27% 13/1830 0.71% 87/28,862 0.30%
MIR—minimum in ec ion a e. S a is ically signi ican di e ences (p< 0.05) a e indica ed by *.
3.3. Hos -Seeking Tick Densi y Model
Based on he Spea man anking es , a se o po en ial explana o y a iables was iden i ied
(Table 4) o be included in he ini ial model. Al i ude as a well-known ac o in luencing ick densi y was
included in he model, despi e i s poo co ela ion wi h he dependen a iable in he es . Fu he mo e,
signi ican di e ences we e ound among he di e en sampling e en s sp ing—summe —au umn
(ANOVA; p< 0.01) and hus he sampling e en was added o he model as a ca ego ical p edic o .
Table 4.
Co ela ion o po en ial explana o y a iables wi h he densi y o hos -seeking Ixodes
icinus icks *.
Va iable Spea man R p-Le el
LST da e o collec ion 0.136 0.096
LST seasonal mean 0.323 0.001
LST seasonal minimum −0.174 0.033
LST seasonal maximum 0.231 0.004
Al i ude 0.089 0.277
Deciduous o es p opo ion −0.073 0.373
Coni e ous o es p opo ion 0.016 0.843
Mixed o es p opo ion 0.207 0.011
O he eg. co e p opo ion −0.174 0.034
P opo ion slope o e 5% −0.028 0.732
P opo ion no hwa ds 0.053 0.523
P opo ion sou hwa ds −0.267 0.001
A e age al i ude −0.008 0.924
NDVI Da e o collec ion −0.055 0.501
NDVI May −0.047 0.569
NDVI June −0.090 0.276
NDVI July −0.226 0.005
In . J. En i on. Res. Public Heal h 2019,16, 1173 7 o 17
Table 4. Con .
Va iable Spea man R p-Le el
P opo ion sou hwa ds −0.267 0.001
A e age al i ude −0.008 0.924
NDVI Da e o collec ion −0.055 0.501
NDVI May −0.047 0.569
NDVI June −0.090 0.276
NDVI July −0.226 0.005
NDVI Augus −0.257 0.002
NDVI Sep embe −0.235 0.004
NDVI seasonal mean −0.244 0.003
NDVI July-Sep embe mean −0.286 0.001
NDVI seasonal maximum −0.126 0.124
NDVI seasonal minimum −0.310 0.001
* LST—land su ace empe a u e, NDVI—no malized di e ence ege a ion index eco ded in he indica ed mon h
o he yea o ick sampling. Seasonal minimum, maximum, and mean alues we e calcula ed o he pe iod
May–Sep embe . P opo ions o a ea o a pa icula cha ac e and a e age al i ude we e calcula ed om a pixel o
sampling si e and eigh su ounding pixels, pixel size—250 m. Va iables included in he ini ial model a e indica ed
in bold.
A log-linea model wi h a Poisson dis ibu ion was used o hos -seeking ick densi y p edic ion.
Acco ding o he esidual analysis, an ou lie was iden i ied and excluded om u he analysis.
All included a iables we e ound o be signi ican in he model (Likely-hood ype 3 es , p< 0.001).
The pa ame e s we e es ima ed, esul ing in he ollowing equa ion (Table 5):
ln (hos -seeking ick densi y) = 5.973866 + season + 0.019914 LST Seasonal Mean
−
0.000770 Al i ude
−
0.492528 Po ion Sou hwa ds −1.046671 NDVI Augus
Table 5. Pa ame e es ima es—hos -seeking ick densi y model *.
Pa ame e Coe icien S anda d E o Wald S a is ics Lowe Con .
Limi (95%)
Uppe Con .
Limi (95%) p
In e cep 5.9739 0.1178 50.7313 5.7429 6.2045 <0.001
LST Seasonal Mean 0.0199 0.0039 5.0860 0.0122 0.0276 <0.001
Al i ude −0.0008 0.0001 −9.5683 −0.0009 −0.0006 <0.001
P opo ion Sou hwa ds −0.4925 0.0208 −23.6768 −0.5333 −0.4518 <0.001
NDVI Augus −1.0467 0.0601 −17.4058 −1.1641 −0.9284 <0.001
Pe iod—Sp ing 0.3935 0.0144 27.2851 0.3652 0.4218 <0.001
Pe iod—Summe 0.0968 0.0154 6.2837 0.0666 0.1269 <0.001
* LST—land su ace empe a u e, NDVI Augus —no malized di e ence ege a ion index eco ded in Augus .
Seasonal mean LST alues we e calcula ed o he ime pe iod o May–Sep embe . P opo ions o a ea o a pa icula
cha ac e (a ea o sou h– acing slopes) we e calcula ed om he o al a ea o he pixel o sampling si e and eigh
su ounding pixels, pixel size—250 m.
Fo he only ca ego ical a iable, “season”, he ollowing pa ame e s we e es ima ed:
sp ing = 0.393470
, summe = 0.096751, au umn = 0. Thus, h ee independen models we e c ea ed o
he di e en pa s o he ick season.
The McFadden’s pseudo R
2
o he p esen ed model eached he alue o 0.203, indica ing a model
wi h e y good i . The compa ison o obse ed and p edic ed ick coun s on indi idual loca ions
oge he wi h i s con idence in e al is depic ed in Figu e 2.
In . J. En i on. Res. Public Heal h 2019,16, 1173 8 o 17
Figu e 2.
Compa ison o obse ed (de e mined in ield) and p edic ed (es ima ed by he model o
hos -seeking ick densi y) I. icinus ick coun s on indi idual sampling si es. G ey lines show he
obse ed alues, ed c osses indica e he alue p edic ed by he model, and ed lines ep esen he
con idence in e al.
3.4. B. bu gdo e i and TBEV P obabili y o In ec ion Model
The p obabili y o in ec ion o a ick by B. bu gdo e i s.l. o TBEV was p edic ed using a logi
model. The pa ame e es ima es and goodness o i da a o he p obabili y o in ec ion o he ick by
B. bu gdo e i and TBEV a e p esen ed in Tables 6and 7, espec i ely. Season o collec ion, he only
ca ego ical explana o y a iable, was no ound o be signi ican o ei he Bo elia o o he TBEV
isk model.
The p obabili y o in ec ion o a ick by spi oche es o Lyme bo eliosis was exp essed by he
ollowing equa ion (Φs anding o he no mal dis ibu ion unc ion):
P obabili y o B. bu gdo e i in ec ion =
Φ
(0.546025
−
1.064178 NDVI May
−
0.153217 Po ion
No hwa ds + 0.000483 Al i ude −0.051443 LST Seasonal Mean)
Table 6. Pa ame e es ima es o he model o p obabili y o B. bu gdo e i in ec ion o icks *.
Pa ame e Coe icien S anda d E o Wald S a is ics Lowe Con .
Limi 95%
Uppe Con .
Limi 95% p
In e cep 0.5460 0.2657 2.0553 0.0243 1.0674 0.040
NDVI May −1.0642 0.167 −6.3716 −1.3926 −0.7328 <0.001
P opo ion no hwa ds −0.1532 0.0422 −3.6290 −0.2360 −0.0713 <0.001
Al i ude 0.0005 0.0002 3.0032 0.0002 0.0008 0.003
LST seasonal mean −0.0514 0.0084 −6.159 −0.0679 −0.0351 <0.001
* LST—land su ace empe a u e, NDVI May—no malized di e ence ege a ion index eco ded in May. Seasonal
mean LST alue was calcula ed o May-Sep embe . P opo ions o a ea o a pa icula cha ac e (a ea o no h- acing
slopes) we e calcula ed om he o al a ea o he pixel o sampling si e and eigh su ounding pixels a ea, pixel
size—250 m.
The p obabili y o in ec ion o a ick by TBEV was exp essed by he ollowing equa ion (
Φ
s anding
o he no mal dis ibu ion unc ion):
P obabili y o TBEV in ec ion =
Φ
(
−
2.275259–0.038585 LST seasonal minimum + 0.218823 Mixed
o es po ion −2.526153 NDVI May + 2.323306 NDVI seasonal maximum).
In . J. En i on. Res. Public Heal h 2019,16, 1173 9 o 17
Table 7. Pa ame e es ima es o he model o p obabili y o TBEV in ec ion in icks *.
Pa ame e Coe icien S anda d E o Wald S a is ics Lowe Con .
Limi 95%
Uppe Con .
Limi 95% p
In e cep −2.2753 0.4913 −4.6309 −3.2658 −1.3322 <0.001
LST seasonal minimum −0.0386 0.0151 −2.5633 −0.0682 −0.0091 0.010
P opo ion mixed o es 0.2188 0.0858 2.5497 0.0497 0.3884 0.011
NDVI May −2.5262 0.5601 −4.5103 −3.6222 −1.4000 <0.001
NDVI seasonal
maximum 2.3233 0.6853 3.3903 0.9201 3.6734 0.001
* LST—land su ace empe a u e, NDVI May—no malized di e ence ege a ion index eco ded in May. LST
seasonal minimum and maximum alues we e calcula ed o May-Sep embe . P opo ions o a ea o a pa icula
cha ac e (a ea co e ed by mixed o es s) we e calcula ed om he o al a ea o he pixel o sampling si e and eigh
su ounding pixels, pixel size—250 m.
Valida ion o he classi ica ion abili y o he p e ious wo models was e alua ed using ROC
analysis. ROC cu es a e depic ed in Figu e 3, oge he wi h hei AUC. AUC o he model o
B. bu gdo e i was 0.58, while he model o TBEV in ec ion eached he le el o 0.64.
Figu e 3.
Recei e ope a ing cha ac e is ics (ROC) o classi ica ion abili y o B. bu gdo e i in ec ion
p obabili y model (a) and TBEV in ec ion p obabili y model (b); AUC—a ea unde ROC cu e.
By joining he model o hos -seeking ick densi y p edic ion wi h ei he he model o p obabili y
o B. bu gdo e i o TBEV in ec ion, a isk model p edic ing he densi y o in ec ed icks was c ea ed.
The ma hema ical models we e in eg a ed in o he GIS sys em and isk maps we e gene a ed (Figu e 4).
Compa ison o he classi ica ion (p edic ion o gene al densi y o icks wi hou he in luence o
season) o he Sou h Bohemian and Ba a ian egions is p esen ed in Table 8. Fu he mo e, all he
epidemiological da a and isk models we e made a ailable o he gene al public ia an online map
po al (h p://gisak. sb.cz/klis a a/index_en.h ml).
In . J. En i on. Res. Public Heal h 2019,16, 1173 16 o 17
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