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Virological outcome among HIV infected patients transferred from pediatric care to adult units in Madrid, Spain (1997–2017)

Abstract

The aim of this transversal study was to describe the virological and immunological features of HIV-infected youths transferred from pediatric to adult care units since 1997 vs. the non-transferred patients from the Madrid Cohort of HIV-infected children and adolescents in Spain. We included 106 non-transferred and 184 transferred patients under clinical follow-up in 17 public hospitals in Madrid by the end of December 2017. Virological and immunological outcomes were compared in transferred vs. non-transferred patients. ART drug resistance mutations and HIV-variants were analyzed in all subjects with available resistance pol genotypes and/or genotypic resistance profiles. Among the study cohort, 133 (72.3%) of 184 transferred and 75 (70.7%) of 106 non-transferred patients had available resistance genotypes. Most (88.9%) of transferred had ART experience at sampling. A third (33.3%) had had a triple-class experience. Acquired drug resistance (ADR) prevalence was significantly higher in pretreated transferred than non-transferred patients (71.8% vs. 44%; p = 0.0009), mainly to NRTI (72.8% vs. 31.1%; p < 0.0001) and PI (29.1% vs. 12%; p = 0.0262). HIV-1 non-B variants were less frequent in transferred vs. non-transferred (6.9% vs. 32%; p < 0.0001). In conclusion, the frequent resistant genotypes found in transferred youths justifies the reinforcement of HIV resistance monitoring after the transition to avoid future therapeutic failures. Beltrán-Pavez, C.; Gutiérrez-López, M.; Rubio-Garrido, M.; Valadés-Alcaraz, A.; Prieto, L.; Ramos, J.T.; Jiménez De Ory, S.; Navarro, M.; Díez-Romero, C.; Pulido, F.; Valencia, E.; Holguín, Á.; Mellado, M.J.; Escosa, L.; García Hortelano, M.; Sainz, T.; González-Tomé, M.I.; Rojo, P.; Blázquez, D.; Prieto-Tato, L.; Epalza, C.; Ramos, J.T.; Guillén, S.; Navarro, M.L.; Saavedra, J.; Santos, M.; Santiago, B.; Aguilera-Alonso, D.; Jiménez De Ory, S.; Carrasco, I.; Roa, M.Á.; Penín, M.; Martínez, J.; Badillo, K.; Oñate, E.; Pocheville, I.; Garrote, E.; Colino, E.; Gómez Sirvent, J.; Garzón, M.; Román, V.; Angulo, R.; Neth, O.; Falcón, L.; Terol, P.; Santos, J.L.; Moreno, D.; Lendínez, F.; Peromingo, E.; Uberos, J.; Ruiz, B.; Grande, A.; Romero, F.J.; Pérez, C.; Lillo, M.; Losada, B.; Herranz, M.; Bustillo, M.; Collado, P.; Couceiro, J.A.; Vila, L.; Calviño, C.; Piqueras, A.I.; Oltra, M.; Gavilán, C.; Montesinos, E.; Dapena, M.; Álvarez, C.; Jiménez, B.; Andrés, A.G.; Marugán, V.; Ochoa, C.; Alfayate, S.; Menasalvas, A.I.; Ruiz Del Prado, Y.; Soler-Palacín, P.; Frick, M.A.; Mur, A.; López, N.; Méndez, M.; Mayol, L.; Vallmanya, T.; Calavia, O.; García, L.; Coll, M.T.; Pineda, V.; Rius, N.; Dueñas, J.; Fortuny, C.; Noguera-Julián, A.; Bernardino, I.; Montes, M.L.; Valencia, E.; Rubio, R.; Pulido, F.; Bisbal, O.; Gaspar Alonso, G.; Berenguer, J.; Díez, C.; Aldamiz, T.; Montilla, P.; Bermúdez, E.; Valerio, M.; Sanz, J.; Arponen, S.; Gimeno, A.; Cervero, M.; Torres, R.; Moreno, S.; Pérez, M.ªJ.; Ryan, P.; Troya, J.; Sanz, J.; Losa, J.; Gómez, R.; Iribarren, J.A.; Rodríguez, F.; Pascual, L.; Aramburu, M.J.; Goikoetxea, A.J.; Aguirrebengoa, L.; Muñoz, J.; Ibarra, S.; Hernández, M.; Gómez Sirvent, J.L.; Rodríguez, J.; Cárdenes, M.Á.; López-Cortés, L.F.; Roca, C.; Llaves, S.; Ríos, M.J.; Rodríguez, J.; Palomo, V.; Pasquau, J.; García, C.; Hernández, J.; Martínez, C.; Rivero, A.; Camacho, Á.; Merino, D.; Martínez, E.; Mateos, F.; Blanch, J.J.; Torralba, M.; Arazo, P.; Samperiz, G.; Crusells, M.J.; San Joaquín, I.; Miralles, C.; Ocampo, A.; Pousada, G.; Mena, Á.; Montero, M.; Salavert, M.; Cuéllar, S.; Galindo, M.J.; Ferrando, R.; Portilla, J.; Portilla, I.; Gutiérrez, F.; Masiá, M.; Robledano, C.; Adsuar, A.; Hinojosa, C.; Bachiller, P.; Abadía, J.; Mostaza, J.L.; Pérez, R.; Galera, C.; Albendín, H.; Pérez, A.; Blanco, J.R.; Burgos, J.; Torres, B.; Lazzari, E.

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Virological outcome among HIV infected patients transferred from pediatric care to adult units in Madrid, Spain (1997–2017)

Author: Beltrán-Pavez, C.; Alfayate, S.; Lazzari, E.; Rubio-Garrido, M.; Colino, E.; Palomo, V.; Hinojosa, C.; Sanz, J.; Masiá, M.; Lendínez, F.; Angulo, R.; López-Cortés, L.F.; Pulido, F.; Díez-Romero, C.; Álvarez, C.; Gutiérrez-López, M.; Prieto, L.; Penín, M.
Year: 2020
DOI: 10.1038/s41598-020-70861-x
Source: https://zaguan.unizar.es/record/99087/files/texto_completo.pdf
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SCIENTIFIC REPORTS | (2020) 10:16891 | ǣȀȀǤȀͷͶǤͷͶ͹;ȀͺͷͻͿ;ǦͶ͸ͶǦͽͶ;ͼͷǦ
www.na u e.com/scien i ic epo s
Vi ological ou come among HIV
in ec ed pa ien s ans e ed
om pedia ic ca e o adul uni s
ǡȋͷͿͿͽȂ͸ͶͷͽȌ
Ca olina Bel án-Pa ezͷ, Miguel Gu ié ez-Lópezͷ, Ma ina Rubio-Ga idoͷ,
Ana Valadés-Alca azͷ, Luis P ie o͸, José Tomás Ramos͹, San iago Jiménez De O yͺ,
Ma isa Na a oͺ, C is ina Díez-Rome oͻ, Fede ico Pulidoͼ, Eulalia Valenciaͽ,
Á ica Holguínͷ* & The Mad id Coho o HIV-In ec ed Child en in eg a ed in he Pedia ic
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The aim o his ans e sal s udy was o desc ibe he i ological and immunological ea u es o
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child en who each adolescence ha e been exposed o a ious an i e o i al (ARV) d ug egimens du ing hei
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ea men s op ions4. Indeed, adolescen s li ing wi h pe ina ally acqui ed HIV and ans e ed o adul ca e
OPEN
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ǡÀǦǡǡǤͺ
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ǤͻǡÓ×ǡǡǡǤͼ
ͷ͸  ǡ ͷ͸ǡ ǡ ǡ Ǥ ͽ ǡ   ǡ   
Ǧǡ ǡ Ǥ *
      ƥ       Ǥ *ǣ
ǤǤǤ
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uni s, ha e highe mo ali y5 and i ological ailu e a es compa ed o younge child en and adul s6, 7. Thus, i
is especially necessa y o check clinical and i ological s a us o his popula ion, including pe iodic su eillance
s udies moni o ing he d ug esis ance mu a ions (DRM) p e alence o he main ARV amilies in clinical use
in o de o ensu e p ope ea men 8.
To da e, ew s udies ha e in es iga ed he clinical s a us and epidemiological da a o ans e ed pa ien s
om pedia ic o adul ca e. Among high-income coun ies, Spain has one o he mos s udied and well epo ed
pe ina al HIV coho , wi h 1,335 HIV-in ec ed child en, adolescen s and you hs egis e ed since 19959,10. The
p esen s udy upda es he demog aphic, epidemiological and i ological ea u es by Decembe 2017 in HIV-1
in ec ed adolescen s/you hs ans e ed o adul uni s in Mad id wi h a ailable esis ance geno ypes s. pa ien s
unde pedia ic ca e.
Resul s
Ǥ By he end
o Decembe 2017, 290 pa ien s o he Mad id Coho o HIV-in ec ed child en and adolescen s we e unde
clinical ollow-up in 17 public hospi als in Mad id, Spain. A signi ican highe numbe o hem we e bo n in
Spain s. o eigne s coun ies (84.1%, s. 15.9%; p < 0.0001). A o al o 279 had da a ela ed ansmission ou e
and 199 ela ed o i al load, CD4 and CD8 coun s. Among subjec s wi h a ailable da a, a signi ican highe
a e acqui ed he in ec ion by e ical ou e (95.3%) s. ans usion (2.9%) o sexual in e cou se (1.8%). In he
las a ailable epo , mos p esen ed ≤ 500 s. > 500 HIV-1-RNA copies/ml (84.4% s. 16.6%; p < 0.0001), > 350
s. ≤ 350 CD4cells/mm3 (89.4% s. 10.6%; p < 0.0001). Mos showed < 15% s. ≥ 15% nadi CD4% (60.8% s.
39.2%; p < 0.0001), < 200 s. ≥ 200 nadi CD4 coun s (41.2% s. 58.8%; p < 0.0001), and ≥ 25% s. < 25% CD8 a e
(92.5% s. 7.5%; p < 0.0001). Majo i y p esen ed CD4/CD8 a io < 1 s. ≥ 1 (58.3% s. 41.7%; p < 0.001).
Among hem, 106 emained in pedia ics ca e uni s and 184 we e ans e ed o adul ca e uni s om 1997
o Decembe 2017. Table1 summa izes hei demog aphic cha ac e is ics. Bo h g oups we e mainly pe ina ally
HIV-in ec ed and 57% o hem we e emale. By Decembe o 2017 he mean age o he coho was 27 (SD 4.2)
yea s old o ans e ed and 15.6 (SD5.7) yea s old o non- ans e ed pa ien s. The median age a diagnosis was
1.3 (IQR 0.4–4.6) yea s o ans e ed and 0.6 (IQR 0.2–4.6) yea s o non- ans e ed pa ien s. Mos (90.7%) o
ans e ed we e diagnosed be o e he yea 2000 and 74.4% in he 1990s. The ansi ion o pa ien s om pedia ic
uni s o adul heal h ca e occu ed a median age o 18.7 (IQR 17.6–20.8) yea s old, and mainly (91.8%) a e
yea 2002. The a e o ans e ed subjec s wi h na i e Spania d o igin was signi ican ly highe han in he non-
ans e ed (92.9% s. 68.9%; p < 0.0001). Only 6% o ans e ed you hs we e bo n in A ica o La in Ame ica
s. 29.2% o non- ans e ed pa ien s (Table1). Conside ing he whole s udy coho wi h a ailable esis ance da a
(n = 208), he a e o ea ed pa ien s was signi ican ly highe han hose ARV-naï e (81.1% s. 18.9%; p < 0.0001),
as well as hose wi h mono-dual s. iple ARV class expe ience (52.3% s. 25.9%; p < 0.0001).
Ǥ Fo
he p esen ans e sal s udy we included only 133 (72.3%) o 184 ans e ed and 75 (70.7%) o 106 non- ans-
e ed pa ien s o he s udy coho wi h a ailable pol sequence o geno ypic esis ance p o iles in hei clinical
epo s. By Decembe 2017 all pa ien s we e on ART and mos (70.7% o non- ans e ed and 65.4% o ans-
e ed) we e i ologically supp essed (< 50 RNA cp/ml). Non- ans e ed pa ien s p esen ed highe median
nadi CD4 cells han ans e ed in pe cen age (15% s. 11%; p < 0.0001) and coun s (379 [IQR 206–500] s.
187 [IQR 41.2–345.5]; p < 0.0001), and simila median CD4 pe cen ages (33.3% s. 31.6%) and CD4 cells coun s
(781 [IQR 561–962] s. 725 [IQR 498–901] cells/mm3). In bo h coho s, a ound 70% o pa ien s had 25–50%
o CD4+ T cells pe cen age a sampling, and o e 70% o hem eached > 500 cells/mm3 (Table1). Howe e ,
s a is ical di e ences we e obse ed in CD8 cells measu es be ween bo h coho s. T ans e ed you hs showed
highe median CD8 pe cen ages (39.6% [IQR 34–53] s. 36% [IQR 28–42]; p = 0.0004) and coun s (873 [IQR
701–1,210] s. 795 [IQR 552–1,077] cells/mm3; p = 0.0232). Nea ly hal (44%) o pedia ic pa ien s achie ed
CD4/CD8 a io ≥ 1, whe eas a signi ican ly highe numbe o he ans e ed coho had CD4/CD8 a io < 1
(61.6% s. 45.3%; p = 0.0291).
A sampling ime, mos ans e ed (88%) and non- ans e ed (66.7%) had p e ious ARV expe ience, wi h
highe median age a i s ART expe ience among ans e ed s. non- ans e ed (3.4 [IQR 0.9–6.4] s. 0.8
[IQR 0.3–4.3] yea s; p = 0.0023) (Table2). Thus, ART s a occu ed signi ican ly ea lie a e HIV diagnosis
in non- ans e ed han in ans e ed: 4.5weeks [IQR 0.4–24.8] s. 1.5yea s [IQR 0.2–4.6] (p < 0.0001). The
mos common ARV expe ience among bo h ans e ed (43.6%) and non- ans e ed pa ien s (60%) we e mono
o dual NRTI-based egimens (Table2). Double NRTI/NNRTI egimens we e signi ican ly less equen in
ans e ed compa ed o non- ans e ed pa ien s (0.9% s. 8%; p = 0.0285) and iple-class expe ience includ-
ing NRTI/NNRTI/PI mo e equen (33.3% s. 18%; p = 0.0612) (Table2). Expe ience wi h o he d ug amilies
( usion, in eg ase, o CCR5 inhibi o ) was sca ce in bo h g oups. Rega ding speci ic ARVs, s a udina (d4T)
exposu e was signi ican ly mo e equen in ans e ed (43.6% s. 20%; p = 0.004) as didanosine (ddI, 44.4% s.
20%; p = 0.0029) and i ona i (RTV, 34.2% s. 6%; p < 0.0001) and abaca i (ABC) we e less equen (12.8%
s. 28%; p = 0.025, da a non-shown).
ǤǦǤ Among 208 pa ien s
wi h a ailable esis ance p o ile, 16 (12%) ans e ed and 23 (31%) non- ans e ed pa ien s we e ART naï e a
sampling. Among hem, TDR we e ound in 4 (17.4%) non- ans e ed and 2 (12.5%) ans e ed pa ien s based
on WHO 2009 SDRM lis (Table2). TDR o NNRTI was mo e equen in non- ans e ed and TDR o NRTI in
ans e ed. TDR mu a ions ound in non- ans e ed we e M41L, D67N, M184V, L210W, T215Y/S in RT and
L24I, D30N, V32I, I54V, V82A and N88D in PR. In ans e ed only M41L in RT.
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Demog aphic cha ac e is ics Non- ans e eda (N = 106) T ans e edb (N = 184) P alue
Female, No. (%) 61 (57.5) 106 (57.6) 1.0000
Rou e o in ec ion, No. (%)
Pe ina ally 93 (87.7) 173 (94) 0.0766
T ans usion 2 (1.9) 6 (3.3) 0.7148
Sexual 2 (1.9) 3 (1.6) 1.0000
Unknown 9 (8.5) 2 (1.1) 0.0024
Age, yea s, mean [SD], No. (%) 15.6 [5.7] 27 [4.2] < 0.0001
0 o < 6 7 (6.6) 0 0.0008
6 o < 12 22 (20.8) 0 < 0.0001
12 o < 18 40 (37.7) 3 (1.6) < 0.0001
18 o < 24 31 (29.2) 44 (23.9) 0.3187
24 o ≤ 30 6 (5.7) 93 (50.6) < 0.0001
> 30 0 44 (23.9) < 0.0001
Pe iod o HIV diagnosis, No. (%)
1985–1989 0 30 (16.3) < 0.0001
1990–1994 4 (3.8) 88 (47.8) < 0.0001
1995–1999 23 (21.7) 49 (26.6) 0.3491
2000–2004 28 (26.4) 12 (6.5) < 0.0001
2005–2009 20 (18.9) 1 (0.6) < 0.0001
2010–2014 20 (18.9) 3 (1.6) < 0.0001
2015–2016 10 (9.4) 1 (0.6) < 0.0001
Unknown 1 (0.9) 0 0.3655
Age a diagnosis, yea s, median [IQR], No. (%) 0.6 [0.2–4.6] 1.3 [0.4–4.6] 0.0742
0 o < 6 86 (81.2) 149 (81.0) 1.0000
6 o < 12 14 (13.2) 27 (14.7) 0.8614
12 o ≤ 18 5 (4.7) 8 (4.3) 1.0000
Unknown 1 (0.9) 0 0.3655
Calenda yea o ans e , No. (%)
1997–1999 – 4 (2.2)
2000–2002 – 9 (4.9)
2003–2005 – 21 (11.4)
2006–2008 – 29 (15.8)
2009–2011 – 47 (25.5)
2012–2014 – 42 (22.8)
2015–2017 – 30 (16.3)
Unknown – 2 (1.1)
Age a ans e , yea s, median [IQR] – 18.7 [17.6–20.8]
O igin o bi hc, No. (%)
Spain (Wes Eu ope) 73 (68.9) 171 (92.9) < 0.0001
Po ugal (Wes Eu ope) 0 1 (0.5) 1.0000
Eas Eu ope 0 1 (0.5) 1.0000
No h A ica 2 (1.9) 2 (1.1) 0.6249
Sub-Saha an A ica 19 (17.9) 2 (1.1) < 0.0001
Sou h and Cen al Ame ica 10 (9.4) 7 (3.8) < 0.0001
Asia 2 (1.9) 0 0.1328
Vi ological ea u esd No. (%)
Non- ans e ed
N = 75 (70.7)
T ans e ed
N = 133 (72.3) P alue
Vi al load, median [IQR], No. (%) 35 [20–37] 37 [20–71] 0.0441
≤ 20 28 (37.3) 43 (32.3) 0.5427
21–50 25 (33.4) 44 (33.1) 1.0000
51–200 4 (5.3) 18 (13.5) 0.0983
201–500 1 (1.3) 5 (3.7) 0.4220
501–1,000 3 (4.0) 2 (1.5) 0.3536
1,001–10,000 3 (4.0) 9 (6.8) 0.5429
> 10,000 3 (4.0) 11 (8.3) 0.3876
Unknown 8 (10.7) 1 (0.8) 0.0014
Con inued
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Ǧͷ
Ǥ To assess he acqui ed d ug esis ance (ADR) p e alence acco ding o d ug amily, we analyzed he las
a ailable esis ance in o ma ion (pol sequence and esis ance p o ile) closes o he end o Decembe 2017 in
50 pedia ic and 117 ART-expe ienced ans e ed you hs (Table2, Fig.1a). ADR p e alence was signi ican ly
highe in p e ea ed ans e ed han non- ans e ed pa ien s (71.8% s. 44%; p = 0.0009), mainly o NRTI
(72.8% s. 31.1%; p < 0.0001) and PI (29.1% s. 12%; p = 0.0262), p esen ing simila NNRTI esis ance (32%
s. 22.2%; p = 0.2453). The p esence o iple-class esis an i uses was simila in bo h g oups (15.2% s. 6.8%;
Table 1. Demog aphic and i ological-immunological ea u es o non- ans e ed and ans e ed pa ien s
in he Mad id coho a he end o Decembe 2017. a Pa ien s om Mad id Coho o HIV-1 in ec ed child en
and adolescen s unde ollow-up in pedia ic uni s. b T ans e ed om pedia ic o adul uni s. c Bi h o igin o
pa ien s by coun y: Po ugal (n = 1), Romania (n = 1), Mo occo (n = 4), Came oon (n = 1), Equa o ial Guinea
(n = 15), Mozambique (n = 1), Nige ia (n = 4), A gen ina (n = 1), Boli ia (n = 2), Colombia (n = 2), Ecuado
(n = 4), Gua emala (n = 1), Hai i (n = 1), Hondu as (n = 3), Mexico (n = 1), Pe u (n = 1), Dominican Republic
(n = 1), China (n = 1), and India (n = 1). d Vi ological ea u es in pa ien s wi h esis ance in o ma ion. Vi al
Load: HIV-1 RNA-copies/ml. In bold, signi ican p alues (< 0.05).
Vi ological ea u esd No. (%)
Non- ans e ed
N = 75 (70.7)
T ans e ed
N = 133 (72.3) P alue
CD4 pe cen age, mean [SD], No. (%) 33.3% [9.2] 31.6% [11.4] 0.2715
< 25% 11 (14.7) 35 (26.3) 0.0571
25–50% 55 (73.3) 90 (67.7) 0.4346
> 50% 1 (1.3) 7 (5.3) 0.2631
Unknown 8 (10.7) 1 (0.8) 0.2715
CD4 cells/mm3, median [IQR], No. (%) 781 [561–962] 725 [498–901] 0.279
≤ 200 2 (2.6) 7 (5.3) 0.4934
201–350 4 (5.3) 8 (6.0) 1.0000
351–500 8 (10.7) 19 (14.3) 0.5244
501–1,000 39 (52.0) 74 (55.7) 0.6646
1,001–1,500 11 (14.7) 22 (16.5) 0.8440
> 1,500 3 (4.0) 2 (1.5) 0.3536
Unknown 8 (10.7) 1 (0.8) 0.0014
Nadi CD4 pe cen age, median [IQR], No. (%) 15% [11–22.7] 11% [3–16.7] 0.0001
< 15% 33 (44.0) 88 (66.2) 0.0022
15–24% 22 (29.3) 36 (27.0) 0.7492
≥ 25% 12 (16.0) 8 (6.0) 0.0265
Unknown 8 (10.7) 1 (0.8) 0.0014
Nadi CD4 (cells/mm3), median [IQR], No. (%) 379 [206–500] 187 [41.2–345.5] < 0.0001
< 200 15 (20.0) 67 (50.4) < 0.0001
200–499 35 (46.6) 57 (42.8) 0.6632
≥ 500 17 (22.7) 8 (6.0) 0.0007
Unknown 8 (10.7) 1 (0.8) 0.0014
CD8 pe cen age, median [IQR], No. (%) 36% [28–42] 39.6% [34–53] 0.0004
< 25% 11 (14.6) 4 (3.0) 0.0036
25–50% 48 (64.0) 92 (69.2) 0.4466
> 50% 8 (10.7) 36 (27.0) 0.0049
Unknown 8 (10.7) 1 (0.8) 0.0014
CD8 cells/mm3, median [IQR], No. (%) 795 [552–1077] 873 [701–1210] 0.0232
≤ 200 1 (1.3) 1 (0.8) 1.0000
201–350 3 (4.0) 3 (2.2) 0.6694
351–500 7 (9.3) 7 (5.2) 0.2651
501–1,000 37 (49.4) 69 (51.9) 0.7735
1,001–1,500 16 (21.3) 37 (27.8) 0.3251
> 1,500 3 (4.0) 15 (11.3) 0.1208
Unknown 8 (10.7) 1 (0.8) 0.0014
CD4/CD8 a io [IQR], No. (%) 0.9 [0.6–2.3] 0.8 [0.4–1.2] 0.0205
< 1 34 (45.3) 82 (61.6) 0.0291
≥ 1 33 (44.0) 50 (37.6) 0.0849
Unknown 8 (10.7) 1 (0.8) 0.0014
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p = 0.2735). Among p e ea ed pa ien s, we iden i ied hese speci ic ADR p esen o e 5% o ea ed pa ien s.
Se en ou en p e alen ADR o NRTIs in he s udy popula ion (M41L, D67N, T69D, K70R, L210W, T215Y and
K219Q) we e signi ican ly mo e equen in he ans e ed s. he non- ans e ed coho , mainly D67N, M41L
Table 2. Vi ological ea u es and HIV d ug esis ance mu a ions in HIV-in ec ed child en and ans e ed
wi h a ailable pol sequence o esis ance p o ile a sampling ime. ART an i e o i al he apy, NRTI nucleoside
e e se- ansc ip ase inhibi o , NNRTI non-nucleoside e e se- ansc ip ase inhibi o , PI p o ease inhibi o ,
INI in eg aseinhibi o , T20 en u i ide, TDR ansmi ed d ug esis ance, DRM d ug esis ance mu a ion,
SD s anda d de ia ion, IQR in e qua ile ange, CRF ci cula ing ecombinan o m, URF unique ecombinan
o m; Sub ype in o ma ion was a ailable in 205 o he 208 pa ien s unde s udy. They included 203 subjec s
wi h pol sequence and wo pa ien s (1 non- ans e ed and 1 ans e ed you h) wi h no a ailable pol sequence
bu a ailable HIV-1 a ian in o ma ion in hei clinical epo .In bold, signi ican p alues (< 0.05). *Bo h
ans e ed adolescen and child had INI, T20 and CXCR5 inhibi o expe ience. a Pa ien s om Mad id Coho
o HIV-1 in ec ed child en and adolescen s unde ollow-up in pedia ic uni s. b T ans e ed om pedia ic o
adul uni s.
Va iable Non- ans e eda (N = 75) T ans e edb (N = 133) P alue
ART exposu e, No. (%)
Naï e 23 (30.6) 16 (12.0) 0.0015
T ea ed 50 (66.7) 117 (88.0) 0.0004
Unknown 2 (2.7) 0 0.1289
ART expe ience, No. (%) 50 117
Mono/dual NRTI 30 (60.0) 51 (43.6) 0.8825
NRTI + NNRTI 4 (8.0) 1 (0.9) 0.0285
NRTI + PI 3 (6.0) 12 (10.2) 0.5566
T iple (NRTI + NNRTI + PI) 9 (18.0) 39 (33.3) 0.0612
Wi h ≥ 3 amily d ugs* 1 (2.0) 1 (0.9) 0.5104
Unknown da a 3 (6.0) 13 (11.1) 0.3972
Age a i s ART expe ience, yea s, median [IQR] 0.8 [0.3–4.3] 3.4 [0.9–6.4] 0.0023
Time om diagnosis o ART s a , median [IQR] 4.5weeks [0.4–24.8] 1.5yea s [0.2–4.6] < 0.0001
ART exposu e ime, yea s, median [IQR] 15.2 [10.5–19.4] 22.7 [20.8–24.4] < 0.0001
Yea o las a ailable sequence, No. (%)
1993–1997 4 (5.3) 15 (11.3) 0.2112
1998–2002 6 (8.0) 21 (15.8) 0.1342
2003–2007 15 (20.0) 38 (28.6) 0.1888
2008–2012 30 (40.0) 32 (24.1) 0.0184
2013–2017 18 (24.0) 27 (20.2) 0.5996
Unknown 2 (2.7) 0 0.1289
Nº o naï e pa ien s pol wi h sequence, No. 23 16
Nº o naï e pa ien s wi h TDR, No. (%) 4 (17.4) 2 (12.5) 1.0000
To NRTI 3 (13.0) 2 (12.5) 1.0000
To NNRTI 0 0
To PI 3 (13.0) 0 0.2550
Double esis ance (NRTI + PI) 2 (8.7) 0 0.5033
T iple esis ance (NRTI + NNRTI + PI) 0 0
Only
To NRTI 1 (4.3) 2 (12.5) 0.5570
To NNRTI 0 0
To PI 1 (4.3) 0 1.0000
Nº o p e ea ed pa ien s, No.
Wi h pol sequences 49 113 1.0000
Wi h esis ance p o ile 1 4 1.0000
HIV-1 a ian s p e alence, No. (%) N = 75 N = 130
B sub ype 51 (68.0) 121 (93.1) < 0.0001
Non-B a ian s 24 (32.0) 9 (6.9) < 0.0001
Pu e non-B sub ypes 8 (10.7) 4 (3.1) 0.0329
CRF 15 (20.0) 4 (3.1) 0.0001
URF 1 (1.3) 1 (0.8) 1.0000
Unknown 0 3 (2.3) 0.3005

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and T215Y (41.7% s. 6.7%, p < 0.0001; 38.9% s. 13.3%, p = 0.0019; 30.1% s. 6.7%, p = 0.0013, espec i ely). No
signi ican di e ences we e ound in ADR o NNRTI and in ADR o PI L90M, change mo e equen in ans-
e ed you h (22.6% s. 8%; p = 0.0405) (Fig.1b).
Figu e2 shows he p edic ed esis ance le el o 20 ARV o he mos used d ug amilies (NRTI, NNRTI, PI)
among he 162 p e ea ed subjec s unde s udy ca ying ADR (49 non- ans e ed and 113 ans e ed) wi h
a ailable pol sequences. The ans e ed coho epo ed a signi ican ly highe a e o pa ien s wi h high esis -
ance le el o a NRTI amily d ugs han non- ans e ed (60.1% s. 27.2%; p = 0.0081), mainly o d4T (38.2% s.
11.4%; p = 0.001), AZT (37.3% s. 11.4%; p = 0.002), ddI (33.3% s. 11.4%; p = 0.006) and ABC (32.4% s. 11.4%;
p = 0.008). The a e o non- ans e ed and ans e ed pa ien s wi h p edic ed high esis ance le el o NNRTI
and PI did no show signi ican di e ences, excep o nel ina i (NFV), wi h highe a es o esis ance among
ans e ed you hs.
Figu e1. Acqui ed d ug esis an p e alence and he mos ep esen a i e mu a ions in he s udy p e ea ed
popula ion om he Mad id Coho o HIV-1 in ec ed child en and adolescen s. (A) ADR p e alence acco ding
o d ug class in 167 p e ea ed pa ien s wi h pol sequence o esis ance da a. (B) ADR p e alence o e 5% in 167
p e ea ed pa ien s. T iple-class: ADR o NNRTI + NRTI + PI. ADR o NNRTI + PI was no ound. E o ba s
indica e exac hyb id Wilson/B own 95% CIs. S a is ical di e ences: ****p < 0.0001; **p < 0.01; *p < 0.05 Chi-
squa e es . Resul s we e calcula ed in 49 PR and 45 RT sequences o esis ance p o iles om non- ans e ed
pa ien s and in 110 PR and 103 RT sequences o esis ance p o iles om ans e ed indi iduals a sampling.
ADR acqui ed HIV d ug esis ance mu a ions, NTP non- ans e ed pa ien s, TP ans e ed pa ien s.
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By con as , a signi ican highes a e o non- ans e ed pa ien s we e suscep ible o all NRTI, NNRTI and
PI d ugs compa e o ans e ed you hs (70.4% s. 28.4%, p < 0.0001; 61.4% s. 32.3%, p = 0.0011 and 83.3% s.
58.4%, p = 0.0011, espec i ely). Addi ional complemen a y da a ela ing o low and in e media e d ug esis -
ance le els o each d ug in he s udy popula ion a e epo ed in Supplemen a y Fig.S1. We iden i ied he spe-
ci ic d ugs wi h he highes suscep ibili y in bo h coho s, ep esen ing in e es ing al e na i es o escue ART
egimens i equi ed. Mos PI and he new NNRTI (DOR, RPV, and ETR) we e he d ugs showing he highes
suscep ibili ies in ans e ed you hs.
ǦͷǤ HIV-1 a ian was known in 205 (98.6%) o he
208 pa ien s wi h a ailable pol sequence (n = 203) geno ypic esis ance p o ile (n = 5). Among hem, 203 (97.6%)
could be success ully sub yped by phy. O e all, 172 (83.9%) o he 205 HIV-1 subjec s we e in ec ed wi h HIV-1
sub ype Bpol, being he p edominan a ian , as p e iously epo ed9,10. HIV-1 sub ype B in ec ions we e mo e
equen han by non-B a ian s (83.9% s. 16.1%; p < 0.0001) in he whole coho .
Ne e heless, sub ype Bpol p e alence was signi ican ly highe among ans e ed s. pedia ic coho (93.1%
s. 68%; p < 0.0001). Non- ans e ed pa ien s p esen ed a highe p e alence o pu e non-B a ian s a pol (10.7%
s. 3.1%; p = 0.033) and in e -sub ype ecombinan (CRF and URF) a ian s han ans e ed (21.3% s. 3.9%;
p = 0.0001).
Among he 33 pa ien s (24 non- ans e ed and 9 ans e ed) in ec ed by HIV-1 non-B a ian s a pol, all
bu 5 cases we e bo n ab oad o a leas one o hei pa en s we e immig an s coming om Sub-Saha an A ica,
Eas e n Eu ope o La in Ame ica (Supplemen a y TableS1). Among he 24 non- ans e ed pa ien s ca ying
non-B a ian s, 6 (25%) we e pu e non-B sub ypes (3C, 1A, 1A6, 1F1), 17 (70.8%) we e CRF, mainly CRF02_AG
(8 cases, 33.3%) and CRF01_AE (2 cases, 8.3%), he mos globally dis ibu ed CRFs. We also ound URF (1 case,
4.2%) om Equa o ial Guinea. Among he 9 ans e ed you hs ca ying non-B a ian s a pol, 3 (33.3%) we e
in ec ed by pu e non-B a ian s (1A, 1A2, 1H), 4 (44.4%) we e CRF (1 CRF01_AE, 1 CRF02_AG, 1 CRF12_BF,
and 1 CRF28_BF) and bo n in Spain, and he emaining 2 ca ied URF including sub ype C o G sequences,
espec i ely (Supplemen a y TableS1).
Discussion
T ansi ion o adul ca e is c ucial o HIV-in ec ed adolescen s. This popula ion aces wi h impo an challenges
o ensu e long- e m i ological supp ession when eaching adul hood. Howe e , li le is known abou hei
cu en heal h s a us in each coun y, despi e an expec ed inc ease in he numbe o child en being ans e ed
in o adul uni s in he coming yea s. Se e al s udies ha e assessed he cu en s a e o adolescen su i o s o
pe ina ally o ea ly acqui ed HIV9, 11–17. Table3 shows all ela ed s udies on HIV-1 pa ien s ans e ed om
paedia ic o adul uni s wo ldwide.
Du ing he ea ly nine ies, Spain had he highes incidence o mo he - o-child ansmission in Wes e n Eu ope
among he oin use s HIV-in ec ed women, leading o high HIV ansmissions in child en bo n be ween 1980
and 199018. The Mad id coho is one o he bes cha ac e ized pe ina al coho in Eu ope and wo ldwide, along
wi h he UK/I eland11, he Ne he lands13 and New Yo k Ci y15 coho s (Table3). Fu u e ansi ioning p og ams
Figu e2. P edic ed high esis ance le el o an i e o i al d ugs in p e ea ed pa ien s om he Mad id Coho
o HIV-1 in ec ed child en and adolescen s. Suscep ibili y le el was es ima ed in he 162 p e ea ed pa ien s
wi h a ailable pol sequence acco ding o he S an o d HIVdb In e p e a ion Algo i hm. E o ba s indica e exac
hyb id Wilson/B own 95% CIs. S a is ical di e ences: **p < 0.01 Chi-squa e es . Resul s we e calcula ed in 48
PR and 44 RT sequences om non- ans e ed pa ien s and in 109 PR and 102 RT sequences om ans e ed
indi iduals a sampling. ABC abaca i , AZT zido udine, d4T s a udine, ddI didanosine, FTC em ici abine,
TDF eno o i disop oxil uma a e, 3TC lami udine, DOR do a i ine, EFV e a i enz, ETR e a i ine, NVP
ne i apine, RPV ilpi i ine, ATV a azana i , DRV da una i , FPV osamp ena i , IDV indina i , LPV lopina i ,
NFV nel ina i , SQV saquina i , TPV ip ana i , NRTI nucleoside e e se- ansc ip ase inhibi o , NNRTI non-
nucleoside e e se- ansc ip ase inhibi o , PI p o ease inhibi o .
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will ep esen a challenge mainly in low-income coun ies28,29 whe e mos HIV-in ec ed-child en and adoles-
cen s li e19,31.
By he end o Decembe 2017, wo- hi ds o he pe ina ally in ec ed pa ien s in ou coho in Mad id (Spain)
had eached adolescence and ansi ioned o adul ca e. He e, despi e simila median age a ans e , ans e ed
you hs in he p esen s udy we e younge a HIV diagnosis (1.3 s. 2yea s old) and a i s ART expe ience (3.4 s.
5.6yea s old) han he same coho 6yea s be o e9. Addi ionally, o e six yea s, ou pe ina al coho had imp o ed
hei immunological s a us signi ican ly ega ding he a e o ans e ed achie ing CD4 T cells > 500cells/mm3
coun s (74% s. 55.3% epo ed in 2011; p = 0.0031), eaching a es highe han in compa able s udies in UK/
I eland11 (42%), New Yo k15 (38.9%) and A gen ina17 (36.3%). The good eco e y o CD4 coun s in he Mad id
coho could be due o an ea ly diagnosis and ea men and imp o ed ART egimens, in ag eemen wi h o he
s udies epo ing ha be e ini ial s a us is associa ed wi h imp o ed immune eco e y20–22.
Rega ding i ological ou come, ou upda ed da a showed a 27% inc ease in ans e ed you hs wi h a ail-
able sequence wi h unde ec able i al load (UVL) in ou Spanish coho om 2011 o 2017 (38.4% s. 65.4%;
p < 0.0001) (Table3). Swedish and I alian coho s p esen ed highe a es o ans e ed pa ien s achie ing UVL12,14
and Canadian and A gen ina ans e ed coho s he lowes 16,17 (42.2% s. 45%, espec i ely), despi e being
conside ed high-income coun ies. Ne e heless, in some high-income coun ies, ans e ed young people
s ill ha e high a es o i ological ailu e immedia ely be o e, du ing, and sho ly a e ansi ion (36% in he
Ne he lands)13, as well as a loss o ollow-up a e ansi ion (nea ly 14% in Spain23 and in he Ne he lands13),
mainly in he i s yea a e ans e .
By he end o Decembe 2017, a hi d o ans e ed you hs s ill had incomple e i al supp ession, and lowe
median CD4/CD8 a io han non- ans e ed pa ien s, a p edic o o inc eased immunoac i a ion and immu-
nosenescence despi e ART
24. The incomple e i aemia supp ession could be explained by pa ial adhe ence o
ea men , a key p oblem in adolescence. Mo eo e , mos ans e ed you hs o he s udy coho was in ec ed in
he mono and bi- he apy e a, ecei ing se e al subop imal ea men s and selec ing a high a e o his o ic DRM,
one o he majo obs acles o an e ec i e ART
25. The complex clinical managemen in pe ina ally-in ec ed you hs
impac s in he cu en immune- i ological con ol o HIV in ec ion compa ed o adul s and o pa ien s unde
pedia ic ca e, who p obably ha e ecei ed op imal ART egimens. Thus, be e immune- i ological si ua ion
du ing ansi ion o adul uni s is expec ed in u u e ans e ed coho s.
We obse ed a high TDR a e in he s udy coho , mainly in he ans e ed g oup. The highe p e alence o
esis ance ound in ans e ed s. non ans e ed indi iduals could be due o he olde age and longe he apy
expe ience wi h less e icacious an i e o i al ea men s and many egimen swi ches s. non- ans e ed. The
ans e ed adolescen s had o ace he mono he apy and dual he apy egimens a ailable a he ime, hus
inc easing he isk o i ological ailu es and unsupp essed i aemia due o esis ance de elopmen . In ou
s udy, he 4 ans e ed wi h TDR we e e ically HIV-1 in ec ed adolescen s, collec i e ound o ha e highe
isk o ea men ailu e han newly HIV in ec ed you h, p obably as a esul o hei li elong in ec ion and hei
Table 3. Compa ison o published s udies om HIV-1 pa ien s ans e ed om pedia ic ca e o adul uni s
wo ldwide. HIV human immunode iciency i us, e e e ence, No. numbe o ans e ed pa icipan s in each
s udy, DX diagnosis, cART combina ion an i e o i al he apy, ART an i e o i al he apy, seq sequences, DRM
d ug esis ance mu a ion, NRTI nucleoside e e se- ansc ip ase inhibi o , NNRTI non-nucleoside e e se-
ansc ip ase inhibi o , PI p o ease inhibi o , UVL unde ec able i al load ≤ 50 RNA copies/ml a las a ailable
i aemia, excep om USA s udy23 (< 400 cp/ml), cp copies; dash: no p o ided da a. HIV non-B a ian s
include HIV-1 sub ypes di e en han sub ype B and ecombinan s. a DRM ound o NRTI + NNRTI, NRTI + PI
and NNRTI + PI d ug class amilies. b DRM ound o NRTI + NNRTI + PI d ug class amilies.
Coun y( e ) No. Da e
Pe ina al
in ec ion
Median age (yea s) ART
expe ience
(mean,
yea )
Ra e o DRM in p e- ea ed pa ien s
Mos equen
DRM
TDR in
naï e
pa ien s
HIV
non-B
a ian s
Clinical s a us
A ans e
HIV
DX
Fi s
cART
No o
polseq To any
Only o
NRTI
Only o
NNRTI
Only
o PI Duala/T ipleb
CD4 > 500
cells/mm3UVL
P esen s udy 184 1997–
2017 94% 18.7 1.3 3.5 22.7 113 75.2% 23.1% 2.6% 7% 28.2%/15.4%
NRTI: D67N
NNRTI:K103N
PI: L90M
19% 6.9% 74% 65.4%
Spain9112 1997–
2011 93.7% 18.9 2 5.6 11.5 58 81% 28.5% 7.1% 14.6% 31%/17.3%
NRTI:M41L
NNRTI:K103N
PI: L90M
0% 1.9% 55.3% 38.4%
UK/I eland11 644 1996–
2016 91% 17.4 6.4 9.6 7.8 381 82% 9.3% 16.2% 0.7% 44%/12%
NRTI:M184V
NNRTI:K103N
PI: L90M
6% – 42% 60%
Sweden12 34 2013–
2015 91% 19 – 9 – 32 – – – – 25%/– – – – – 96%
The
Ne he lands13 54 1996–
2014 78% 18.8 8.4 10.4 – – – – – – – – – – – –
I aly14 24 2004–
2006 100% 18 – – 14 13 69.2% – – – 46.2%/– NRTI:M41L – – – 75%
USA15 735 2006–
2015 100% 22 – – – – – – – – – – – – 38.9% 51.8%
Canada16 45 1999–
2011 71% 18.1 – – – 38 73.7% 21% 55.3% 50% –/31.6% – – 20%
28.9%
< 200 cells/
ml
42.2%
A gen ina17 37 2011 100% 18 – – 15 – – – – – –/45%
NRTI: D67N
NNRTI:K103N
PI: V82A
– – 36.3% 45%
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hea ily ART exposi ion6. Mo eo e , HIV in ec ed pa ien s du ing childhood in ou ans e ed coho we e
mainly in ec ed du ing he ea ly 1990s, when Spain had one o he highes a es o AIDS in Eu ope. The inad-
equa e ART egimens in hei HIV-in ec ed mo he s could also con ibu e o he high esis an le el ound in
pe ina ally in ec ed ans e ed g oup.
The ART expansion in low-income coun ies whe e mos pedia ic in ec ions occu and he insu icien
adhe ence suppo , equen subop imal ART egimens in HIV-in ec ed mo he s and child en, lack o ou ine
i al load (VL) and esis ance moni o ing in mos o hese se ings, can lead o he sp eading o esis an i uses
among new in ec ions in naï e and ea ed child en. In ac , nea ly 85% o naï e non- ans e ed pa ien s in ou
s udy we e bo n ab oad o om HIV-in ec ed pa en s coming om low-income coun ies, whe e ART has been
expanding in he las yea s, wi hou he implemen a ion o a ailabili y o op imal ART egimens26. TDR a e in
pe ina ally HIV-1 in ec ed pa ien s in Mad id was highe han in pe ina al coho s om UK/I eland (6%)11, 27,
and in mos pedia ic coho s wo ldwide28, as well as in adul s om Eu ope (8.3%)29 and in he Spanish AIDS
Resea ch Ne wo k o adul s (7.9%)30. The p esence o TDR has impo an clinical consequences due o he
in luence o baseline d ug esis ance pa e ns in he ou come o i s -line ART in child en31 and adul s29 and is
a s ong p edic o o ea men ailu e.
ADR p e alence among ART-expe ienced pa ien s has dec eased o e ime in he Mad id coho o all
d ug amilies (Supplemen a y TableS2). The signi ican educ ion in he a e o non- ans e ed pa ien s wi h
ADR o NRTI class ( om 62.1% in 2011 o 28% in 2017; p < 0.0001) could likely be due o he implemen a ion
o LPV/ as a i s -line combined an i e o i al ea men (cART) in Spain since 2008, and he wi hd awal o
NFV in 200732. The signi ican dec ease o ADR o PI in pa ien s unde pedia ic ca e and ans e ed you hs in
Spain could e lec he imp o emen s in ART due o a ailabili y o new d ug classes in he las yea s. Ne e he-
less, in 2017 ans e ed pa ien s s ill main ained he highes ADR p e alence o NRTI (64.1%), since i was he
i s a ailable d ug class o clinical use, ABC and AZT being he mos comp omised d ugs, along wi h ddI and
d4T no-longe -used ARV compa ing o non- ans e ed pa ien s (Fig.2). This was due o he highe p esence o
D67N, M41L and T215Y esis ance mu a ions in RT in 42.7%, 38.8% and 30.1% o ans e ed you h, espec i ely.
T iple-class esis ance was de ec ed in 15.2% o ans e ed you hs, a lowe a e han he one p e iously
epo ed in he same s udy coho (17.3%), as in o he ans e ed coho s in Canada (31.6%)16 and A gen ina
(45%)17, and highe han in UK (12%)11. All pa ien s ca ying iple-class esis ance in ou coho we e bo n
be ween 1987 and 1996, and 43.9% o hem had expe ienced mono/dual NRTI he apies be o e cART imple-
men a ion, which may ha e led o ea men ailu e and subsequen ADRM selec ion due o he incomple e
i al supp ession33. I is impo an o highligh ha he compa ison be ween ans e ed and non- ans e ed
pa ien s was comple ely ela ed wi h he ime-pe iod when hey we e in ec ed and ea ed, sugges ing ha a
di ec compa ison may no be accu a e in his s udy.
Despi e high ADR a e o he h ee main ARV amilies among ans e ed, ou da a showed ha some NNRTI
(DOR, ETR, and RPV) and PI (DRV and TPV) emained good op ions o escue he highly p e ea ed pa ien s
in he s udy coho . Mo eo e , nowadays young people could bene i om newly licensed d ugs o ea HIV-1
in adul s, like cell-en y and in eg ase inhibi o s34. Su eillance o TDR and ADR p e alence among HIV-1
in ec ed child en and adolescen s is c i ically impo an in de e mining i changes o empi ic i s , second and
hi d-line ART egimens a e equi ed35.
Rega ding HIV in ec ing a ian s, in ec ions wi h non-B a ian s in non- ans e ed pa ien s inc eased sig-
ni ican ly om 2011 o 2017 (11.5% o32%; p = 0.0004), mos ly due o he inc emen o child en in ec ed by CRF
(6.9% s. 20%; p = 0.0065). Despi e ha ac ha sub ype B was he p e alen a ian in he ans e ed coho ,
non-B in ec ions also inc eased among ans e ed om 1.9% (2011) o 6.9% (2017) (Table3). Ine i ably, his
i al he e ogenei y could a ec he e icacy o HIV-1 moni o ing, a ec ing he clinical managemen o HIV-1
in ec ion o disease p og ession36,37.
The main limi a ion o he s udy is ha esis ance esul s de i ed om a ailable pol sequence o esis ance
p o iles closes o Decembe 2017, anging om 1993 o 2017 bu mainly da ing om 2005 o 2010 (Table2).
The e o e, esis ance pa e ns may no p ecisely e lec ea u es in Decembe 2017. Mo eo e , we only used da a
om pa ien s wi h a ailable esis ance es ing, excluding o he i ological s udy pa ien s wi hou pol sequences.
VL quan i ica ion assays wi h di e en limi o de ec ions di e ed ac oss pa ien s and yea s du ing he clinical
ollow-up o he s udy coho .
The wo ld is home o mo e young people (ages 10–24yea s old) now han a any o he ime in his o y, and
we need o ocus and ca e o his collec i e i we wan o end he AIDS epidemic by 2030. Ou s udy demon-
s a ed ha good clinical managemen could achie e he goal ha mos HIV-1-in ec ed pa ien s ans e ed
om pedia ic ca e o adul uni s may main ain i ological supp ession and high CD4 coun s, dec easing ADR
p e alence and imp o ing hei clinical s a us. This highligh s he impo ance o VL and d ug esis ance moni-
o ing wo ldwide in all HIV-in ec ed-pedia ic and young popula ion o ART op imiza ion i equi ed du ing
he ch onic clinical ollow-up o in ec ion.
Me hods
Ǥ In his mul icen e obse a ional e ospec i e and ans e sal s udy, we iden i ied 290
pa ien s en olled in he Mad id Coho o HIV In ec ed Child en and Adolescen s including all you hs ans-
e ed om pedia ic ca e o adul uni s and all non- ans e ed pa ien s by Decembe 2017. Among hem, 208
(133 ans e ed and 75 non- ans e ed pa ien s) had a leas one a ailable HIV-1 polime ase (pol) sequence
o geno ypic esis ance p o iles in hei clinical epo s, p esen ing simila demog aphical and clinical ea u es
o he o e all popula ion. Fo esis ance es ing and HIV-1 a ian cha ac e iza ion we selec ed he sequence/
p o ile closes o Decembe 2017 pe pa ien , de ining as sampling ime he yea o collec ion o sequenced
samples, which anged om 1993 o 2017. Mos sequences we e p e iously epo ed by ou g oup9,10, excep 20