The effect of Benzothiazolone-2 on the expression of Metallothionein-3 in modulating Alzheimer's disease
Abstract
Metallothioneins (MTs) are a class of ubiquitously occurring low-molecular-weight cysteine- and metal-rich proteins containing sulfur-based metal clusters. MT-3 exhibits neuro-inhibitory activity. The possibility to enhance the expression of MT-3 or protect it from degradation is an attractive therapeutic target, because low levels of MT-3 were found in brains of Alzheimer's disease (AD) patients.
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Brain and Behavior. 2017;e00799. | 1 of 9 https://doi.org/10.1002/brb3.799 wileyonlinelibrary.com/journal/brb3 Received:5January2017 | Revised:14June2017 | Accepted:2July2017 DOI: 10.1002/brb3.799 ORIGINAL RESEARCH The effect of Benzothiazolone2 on the expression of Metallothionein3 in modulating Alzheimer’s disease Sudeep Roy1 | Jaromir Gumulec2,3,6 | Akhil Kumar4 | Martina Raudenska2,3 | Mohd Hassan Baig5 | Hana Polanska2,3,6 | Jan Balvan3,6 | Mansi Gupta4 | Petr Babula3 | Jan Odstrčilík1 | Inho Choi5 | Ivo Provaznik1,3 | Michal Masarik2,3,6 ThisisanopenaccessarticleunderthetermsoftheCreativeCommonsAttributionLicense,whichpermitsuse,distributionandreproductioninanymedium, provided the original work is properly cited. ©2017TheAuthors. Brain and BehaviorpublishedbyWileyPeriodicals,Inc. 1DepartmentofBiomedicalEngineering, Faculty of Electrical Engineering and Communication,BrnoUniversityof Technology,Brno,CzechRepublic 2CentralEuropeanInstituteofTechnology, BrnoUniversityofTechnology,Brno,Czech Republic 3DepartmentofPhysiology,Facultyof Medicine,MasarykUniversity,Brno,Czech Republic 4BiotechnologyDivision,CSIR–Central InstituteofMedicinalandAromaticPlants, Lucknow,India 5SchoolofBiotechnology,Yeungnam University,Gyeongsan,Korea 6Department of Pathological Physiology,FacultyofMedicine,Masaryk University,Brno,CzechRepublic Correspondence SudeepRoy,DepartmentofBiomedical Engineering,FacultyofElectricalEngineering andCommunication,BrnoUniversityof Technology,Brno,CzechRepublic. Email: r[email protected]om MichalMasarik,DepartmentofPhysiology, FacultyofMedicine,MasarykUniversity,Brno, CzechRepublic. Email:[email protected] Funding information MinistryofEducation,YouthandSports oftheCzechRepublicundertheproject CEITEC2020,Grant/AwardNumber: LQ1601;MinistryofEducation,Youthand SportsoftheCzechRepublicunderthe SpecificUniversityResearchgrants,Grant/ AwardNumbers:MUNI/A/1355/2016and MUNI/A/1401/2016 Abstract Introduction: Metallothioneins (MTs) are a class of ubiquitously occurring lowmolecularweight cysteineand metalrich proteins containing sulfurbased metal clusters. MT3 exhibits neuroinhibitory activity. The possibility to enhance the expressionofMT-3orprotectitfromdegradationisanattractivetherapeutictarget, because low levels of MT-3 were found in brains of Alzheimer’s disease (AD) patients. Objectives: The primary objective of this study was to test an enhancement of MT3 cellular concentration after MT-3 binding treatment, which could prevent MT-3 degradation. Methods: MTT assay, flow-cytometry, fluorescence microscopy, quantitative real- timepolymerasechainreaction,andimmunodetectionofMT3wereusedforanalysis ofeffectofSTOCK1N-26544,STOCK1N-26929,andSTOCK1N-72593onimmortalizedhumanmicroglia-SV40cellline. Results:AllthreetestedcompoundsenhancedconcentrationofMT-3proteinincells andsurprisinglyalsomRNAconcentration.IC50valuesoftestedmoleculesexceeded about ten times the concentration that was needed for induction of MT3 expression. ThetestedcompoundBenzothiazolone-2enhancedapoptosisandnecrosis,butitwas notofsevereeffect.About80%ofcellswerestillviable.TherewasnoseriousROS- generation and no severe decrease in mitochondria numbers or stress induced endoplasmic reticulum changes after test treatments. The selected compound showed stable hydrophobic and electrostatic interaction during MT3 ligand interaction. Conclusion:Benzothiazolone-2compoundssignificantlyenhancedMT-3proteinand mRNAlevels.Thecompoundscanbelookeduponasoneoftheprobableleadcompounds for future drug designing experiments in the treatment of Alzheimer’s disease. KEYWORDS Alzheimer’sdisease,flowcytometry,immunodetection,metallothionein-3,moleculardynamics, qRT-PCR
2 of 9 | ROY et al. 1 | INTRODUCTION Alzheimer’s is the most common form of dementia; it isa term for memory damage and other intellectual capacities that are serious enoughtoimpede dailylife.Alzheimer’sdisease accountsfor60 to 80 percent of dementia cases. The neuropathological hallmarks of Alzheimerdisease(AD)arecomprisedof“positive”lesionssuchasamyloidplaques,cerebralamyloidangiopathy,neurofibrillarykinks,glial responsesand“negative”lesionssuchasneuronalandsynapticloss (Haass&Selkoe,2007;Iqbal,Liu,Gong,AlonsoAdel,&Grundke-Iqbal, 2009). The neurochemical elements responsible for this agelinked compulsive advance are still poorly described. The growing evidence supportsasignificantroleforbiometalssuchascopper(Cu),iron(Fe), andzinc(Zn)inAβaccretionandneuronalrelapse(Bush&Tanzi,2008; Lovell, Robertson, Teesdale, Campbell, & Markesbery, 1998; Miu & Benga, 2006; Roberts, Ryan, Bush, Masters, & Duce, 2012; Zatta, 2008). The plasma Cu/MT ratio was found to be symptomatic of diseaseadvancementinADpatients.Thisconnotationhintsataprobable connection between some pathological features of the disease and the MTs expression. Metallothioneins (MTs) are a family of lowmolecular weight and cysteinerich proteins present in all eukaryotes. The MT family is encompassedoffourmainmembers(MT-1toMT-4)withmultipleisoform subclasses. MT1 and MT2 are extensively expressed in almost alltissues,MT-3mainlyinthecentralnervoussystem(CNS),whereas MT-4 is present in squamous epithelial tissue (Palacios, Atrian, & Capdevila,2011). Many studies show that MT-3 mRNA is downregulated in AD brains (Barnham etal., 2004; Carrasco etal., 1999; Kim, Nam, Jeon, Han, & Suk, 2012; Naruse etal., 1994; Streit, 2004; Uchida, Takio,Titani,Ihara,&Tomonaga,1991;Yu,Lukiw,Bergeron,Niznik, &Fraser,2001);thismight,therefore,contributetotheupsurgeof abnormal neuronal development that is associated with the disease. Degradation and deficiency in MT3 may lead to severe disruption of lysosomal biogenesis and cytoskeleton dynamics. Dysfunction of lysosomes and actin cytoskeleton in MT3null astrocytes contributed toaccumulationoftoxicAβs proteins and other damaged proteins. ApartfromthefunctionofMT-3inlysosomesandcytoskeleton,homeostasis of metal ions managed by MT3 may also play a key role in AD(Bondaetal.,2011). Furthermore,MT-3-nullastrocyteshadlowlevelofzincinlysosomeandpresentedautophagydefect.Autophagyseemstobeabnormalduetoalterationoftheendo-lysosomalpathway,whichimpairs fusionofautophagosomeswithlysosomes.Inaddition,arecentreport detailsthecontributionofmitophagy,aspecializedformofautophagythatremovesdamagedmitochondriainAD(Moreiraetal.,2007). Interestingly,theactivationofautophagycanpromotedegradationof APP/Aβandreducetaupathology(Nixon,2007).Therefore,theautophagy pathwayis considerablymorecomplexinAD because itis simultaneouslyinducedandimpaired.APP/Aβ can be generated in autophagosomesatlowlevelsinaphysiologicalenvironment;however, during disease conditions autophagosomes rapidly accumulate in the cell body and axonal terminals due to either impaired autophagic flux oradefectedendosomalpathway(Lee,2009;Lee,Park,Kim,&Koh, 2010). Martin et al. (2006) showed that in the Tg2576 transgenic mouse modelofAD,MT-3waslessthanthatfoundinwild-typemice.Italso establishesthe rolesofMT-3 andNnosinAlzheimer’sdisease.The pathological changes that develop in this mode might be responsible for the degradation of MT3. Roy, Kumar, Baig, Masarik, and Provaznik (2015) reported that natural-based compounds were effective in modulatingAlzheimer’s disease. The in silico findings (which include studies of both pharmacodynamics and pharmacokinetic properties) show that MT3 was abletobindwithSTOCK1N-26544,26929,and72593compounds. The former two compounds contain Benzothiazolone-2 as a fragment (3-(2-oxobenzo[d]thiazol-3(2H)-yl)propanoicacid (propanoic acidofBenzothiazolone-2)wasusedinthesynthesis).Itisobtained from Micrococcus sp. found in Tedania ignis,whereasthelattercompoundisamodifiedbaseoftryptamineobtainedwidelyinplants,such as Acacia spp.,Lens esculenta,Prosopsis juliflora,aswellas fromthe fungi Ponaeolus foenisicii,Coprinus micaceus and from the gorgonian Paramuricia chamaeleon. The current work validates the in silico findings for the compounds. Experiments were performed to see the effect of these compoundsonliveimmortalizedhumanmicrogliacells(SV40)and their effect on MT3 cellular concentration. The study also includes a binding freeenergy calculation of the tested natural compound complexes and the standard controls through molecular dynamics simulations. 2 | MATERIALS AND METHODS 2.1 | Cell cultures and cultured cell conditions Theimmortalizedhumanmicroglia-SV40(AppliedBiologicalMaterials Inc.,Richmond,BC,Canada)wereusedinthisstudy.Thesecellsare positiveforNGF[nervegrowthfactor(BetaPolypeptide)],Iba1ionizedcalcium-bindingadaptermolecule1,TREM2(triggeringreceptor expressedonmyeloidcells2),CD11b,andCD68.Theimmortalized humanmicrogliawasculturedinPrigrowIIIMediumwith10%fetal bovine serum in collagencoated flasks. The medium was supplementedwith penicillin(100U/ml) and thecells weremaintained at 37°Cinahumidifiedincubatorwith5%CO2. 2.2 | RNA isolation and reverse transcription TriPure Isolation Reagent (Roche, Basel, Switzerland) was used for RNAisolation.RNAsampleswithoutreversetranscriptionwereused asthenegativecontrolforqRT-PCR,inordertoexcludeDNAcontamination.TheisolatedRNAwasusedforthecDNAsynthesis.RNA (1000ng)wastranscribedusingtheTranscriptorFirstStrandcDNA SynthesisKit(Roche),whichwasappliedaccordingtothemanufacturer’sinstructions. ThecDNA (20μl) preparedfrom thetotal RNA wasdilutedwithRNase-freewaterto100μl; 5 μl was then directly analyzedusingtheLightCycler®480IISystem(Roche).
| 3 of 9 ROY et al. 2.3 | Quantitative realtime polymerase chain reaction qRTPCR was performed using TaqMan gene expression assays and the LightCycler®480 II System (Roche). The amplified DNAwas analyzed bythe comparative Ctmethod using βactin asareferencegene.TheprimerandprobesetsforACTB(assay ID: Hs99999903_m1) and MT3 (assay ID: Hs01921768_s1) were selected from the TaqMan gene expression assays (Life Technologies,USA).TheqRT-PCRwasperformedunderthefollowing amplification conditions: total volume of 20 μl,initialincubation at 50°C/2 min followed by denaturation at 95°C/10 min; then45cyclesat95°C/15sandat60°C/1min.Allsampleswere measured in duplicates. 2.4 | Immunodetection of MT3 Extraction of total protein from the cells was processed using the Pierce®RIPABuffer(ThermoScientific,Rockford,IL,USA)inaccordance with the protocol provided. All protein concentrations were determined with the Pierce® BCA Protein Assay Kit. Protein samples were diluted to 10 μg/μl, then 1μl was slowly spotted onto a 0.2μmImmunBlot®PVDFmembrane(BioRadLaboratories,Hercules, CA,USA)andair-dried.Toblocknonspecificbindingsites,themembranes were incubated using 5% Blotting-Grade Blocker (BioRad Laboratories) for one hour at room temperature. They were then incubatedusingAnti-MT-3antibody(productno.ab76618;Abcam, Cambridge,UK),andwithAnti-β-actin(productno.ab8227;Abcam). The antibody was diluted 1:1000 using 5% Blotting-Grade Blocker (BioRadLaboratories). The membranes were then washed four times in PBS (Sigma- Aldrich,St.Louis,MO,USA)forfiveminuteseach,beforebeingincubatedwitha secondaryantibody (Peroxidase-LabeledAnti-Rabbit IgG(productno.PI-1000;Vector,Burlingame,CA,USA)).Thiswasdiluted1:2000using5%Blotting-GradeBlocker.AfterwashinginPBS, allblotswerevisualizedonphotosensitivefilm.Densitometricanalyses of the membraneswere performed using GeneSnap (Syngene, Cambridge,UK). 2.5 | Cytotoxicity testing – MTT test The suspension of 5000 cells was added to each well of standard microtiterplates.Avolumeof200μlwastransferredtowells2–11.The medium (200 μl) was added to the first and the last column (1 and 12(control)). The plates were incubated for 2 days at 37°C to ensure cellgrowth.Themediumwasremovedfromcolumns2–11.Columns 3–10werefilledwith200μlofthemedium,whichcontainedanincreased concentration of tested compound diluted in dimethylsulfoxide(DMSO)(0–1μmol/l).Asacontrol,columns2and11werefilled with the medium without tested compound. Theplateswereincubatedfor 12and 24hr,then the medium wasremovedandthecellswerewashedinPBS.Columns1–11were filled with 200 μlofmedium,whichcontained50μl of MTT (5 mg/ mlinPBS)incubatedinahumidifiedatmosphereforfourhoursat 37°Candthenwrappedinaluminumfoil.Aftertheincubation,the MTTcontaining medium was replaced with 200 μlof99.9%DMSO in order to dissolve the MTT-formazan crystals. Subsequently, 25 μl of glycine buffer was added to all wells; absorbance was immediately determined to be 570nm (VersaMax microplate reader, MolecularDevices,Sunnyvale,CA,USA).Allsamplesweremeasured in duplicates. 2.6 | Confocal microscopy and cell staining Forthepurposeoffluorescencemicroscopy,thecellswerecultivated directly on microscope glass slides (75×25mm, thickness 1mm, MenzelGlässer,Braunschweig,Germany)inPetridishesintheabove- describedcultivationmedia(see“Culturedcellconditions”).Thecells weretransferreddirectlyontotheslides,whichwerethensubmerged in the cultivation media. Afterthetreatment,themicroscopeglassslideswithamonolayer of cells were removed from the Petri dishes, rinsed in the cultivationmediumwithout supplementationandPBS bufferand directly used for staining and fluorescence microscopy. The cells were incubated using the following highly specific fluorescent probes: • ReactiveoxygenspecieswerevisualizedusingCellROXDeepRed reagent(LifeTechnologies, 5μmol/L, cell-permeant,life-cellstain withabsorption/emissionmaximaof644/665nm) • Mitochondria were visualized using MitoTracker Green FM (Life Technologies,300nmol/L,cell-permeantlife-cellstainwithabsorption/emissionmaximaof490/516nm) • The endoplasmic reticulum was visualized using ER-Tracker Red (LifeTechnologies,1μmol/L,cell-permeant,life-cellstainwithabsorption/emission maxima of 587/615 nm). After incubation (45min, 37°C, dark), the cells were washed three times with PBS buffer (0.05mol/L, pH 7.0) and observed under the confocalmicroscope(LeicaTCSSP8 X, Germany) using appropriateexcitationandemissionwavelengths.Quantitativeanalysis was performed typically from 10 fields of view. For image analysis, NIS elements BRAnalysis (Nikon instruments, Tokyo, Japan) softwarewasused.Averagefluorescenceintensitywasmeasuredin equally confluent fields of view. Results were compared statistically using ttests. 2.7 | Flow cytometry analysis of cell death Doublestaining with fluorescein isothiocyanate (FITC)/propidium iodide(PI)wasundertakenusing theAnnexinV-FLUOS-stainingkit (RocheAppliedScience)accordingtothemanufacturer’sprotocols,in ordertodeterminethepercentagesofviable,apoptotic,andnecrotic cells following the exposure to Plumbagin. Briefly,thecellswereharvestedbyrepetitivepipettingandwere washed two times with PBS (centrifuged at 2000rpm for 5min),
4 of 9 | ROY et al. resuspended in 100 μlofAnnexin-V-FLUOSlabelingsolutionandincubatedfor15mininthedarkat15–25°C.AnnexinV-FITCbinding wasdetectedbyflowcytometry(PartecGmbH,Münster,Germany) (Ex=488nm,Em=533nm,FL1filterforAnnexin-V-FLUOSandFL3 filter for PI). 2.8 | Thermodynamic studies - MD simulation The MM-PBSA (Molecular Mechanics energies combined with Poisson–BoltzmannSurfaceArea)approach,combinedwithmoleculardynamics(MD)simulations, iswidelyusedin biomolecularcomplexes as a way to estimate the protein ligand interaction energies and predict bindingfree energies. It also evaluates the relative stabilities of different biomolecular structures. Additionally, it can be used to rescoreasetofdockedcomplexes,therebyimprovingtheabilityto distinguish between active and inactive lead molecules. The molecular dynamics simulation of MT3 docked complexes was performed using the GROMACS 4.5.52 (Berendsen etal., 1995; Lindahl etal., 2001)package,withastandardGROMOS96forcefieldfor10,000ps. Binding freeenergy calculations were performed in this work for the ligandbound complexes in order to provide further insight into the study. 3 | RESULTS 3.1 | The cytotoxic evaluation of benzothiazolone2containing substances in microglia cells The IC50 value for STOCK1N-26544 is 162.4nmol/L, for STOCK1N-26929 it is 100nmol/L and for STOCK1N-72593 it is 233.4nmol/L. Thus, STOCK1N-26929 shows the highest effect on cell metabolic activity. Nevertheless, the IC50 values for all tested molecules exceed the required concentration for the induction of MT3 expression by about 10 times (see Figure 1). TheAnnexinV+/PI+(Q2quadrant)depictslatenecrosisanddying cells. The rate of the necrosis triggered by tested compounds did not exceed4%(onlyshowinga2.12%increase,comparedtothestained control). The Annexin V+/PI- (Q4) population represents apoptotic cells or early oncotic cells (see Figure 2). The largest amount of apoptoticorearlyoncoticcellswasfoundin10nmol/LSTOCK1N-72593 after treatment (19.93%; 12.31% increase compared to the stained control). Nevertheless, some portion of oncotic cells is able to reverseoncosisandcouldtherebysurvive;thus,nosevereincreasein the total number of dying cells was found after treatment with tested compounds (see Figure 2). Confocal microscopy revealed no significant morphological changes that had been induced by studied compounds. On the other hand,weusedtwoprobestolocalizemitochondriaandtheendoplasmicreticulum.WhereasMitoTrackerGreenFMlocalizesmitochondria regardless of mitochondrial membrane potential, ER-Tracker Red, a conjugateofgreen-fluorescentBODIPY®TRdyeandglibenclamide, alsoreflectsexpressionofsulphonylureareceptorsofATP-sensitive K+ channels and thereby reflects the ER function. The doublestaining revealed no significant decrease in fluorescence corresponded to both mitochondria and ER for the tested compounds. Compound 26544showedsomeabilitytogenerateROS,whichwerecolocalized withmitochondria(seeFigure3).Nevertheless,ROSproductionwas rather weak. 3.2 | Benzothiazolone2 enhances expression of MT3 in microglia cells mRNAexpressionofMT-3wasrelativelylowincontrolcellswithout treatment.Allthethreetestedcompounds enhancedexpressionof MT-3mRNAinbothtestedconcentrations(5nmol/Land10nmol/L, respectively)(seeFigure4a). Expression of MT3 protein was undetectable in control cells withouttreatment.Allthethreetestedcompoundsenhancedexpression of MT-3 protein (see Figure4b). Nevertheless, compound 72593 caused visible enhancement only in 5nmol/L concentration. Other compounds enhanced expression of MT3 protein in tested concentrations(seeFigure4c). FIGURE1 MTT tests for selected compounds on cell lines. The halfmaximal inhibition concentration (IC50) is indicated in the graph. Error bars indicate standard deviations
| 5 of 9 ROY et al. 3.3 | Thermodynamic studies on MT3benzothiazolone complexes Binding freeenergy studies that validate the above findings were also performed.The analysis was carried out for the Benzothiazolone-2 docked complexes only, since the above results were encouraging.The molecular docking representation is provided in Figure S1. It clearly states that the tested molecules (STOCK1N-26929 and STOCK1N-26544) both have stable binding free-energies values in theformofpotential,polar,andnonpolarsolvationenergiesthatare comparable to the standard controls (Table 1). It also states that both hydrophobic and electrostatic interactions are important for protein ligandinteractionincaseofMT-3forAlzheimer’sdisease. 4 | DISCUSSION The possibility to enhance the expression of MT3 or protect it from degradation is an attractive therapeutic target, because low levelsofMT-3werefoundinADbrains.Inthisstudy,wetestedan FIGURE2 Flowcytometricanalysisofapoptosis/necrosisbyAnnexinV/Propidiumiodide(PI)staining.(a)Stainingofcontrols(notstained andnottreated,andstainednontreated).(b)Flow-cytometricanalysisofcelllinestreatedwith5and10nmol/Loftestedagents.Notethe differencesinAnnexinV+/PI+(Q2)andAnnexinV+/PI-(Q4)populations
6 of 9 | ROY et al. FIGURE3 (Fluorescencemicroscopyanalysisofmitochondriaandendoplasmicreticulum(ER).ERisstainedwithredERtracker, mitochondria)[MR1]withgreenMitoTracker.ReactiveoxygenspecieswerevisualizedusingCellROXDeepRedreagent
| 7 of 9 ROY et al. enhancement of MT3 cellular concentration after MT3 binding treatment,whichcouldpreventMT-3degradation. ThethreecompoundsunderinvestigationwereSTOCK1N-26929, STOCK1N-26544 (Benzothiazolone-2 as fragment), and STOCK1N- 72593 (modified tryptaminebased). The expression of MT3 protein was undetectable in control cells withouttreatment.AllthreetestedcompoundsenhancedconcentrationofMT-3proteinincellsandsurprisinglyalsomRNAconcentration.Nevertheless,STOCK1N-72593wasrelativelylesseffective. It is to be noted here that different concentrations of tested compounds can influence expression of MT3 differently. Epigenetic mechanisms and different types of activation of signaling pathways are suspected inthiscase.Furthermore,theexpressionofMT-3couldberegulated at the posttranscriptional level, which was also observed in earlier studies(Garrettetal.,2005).Theexperimentscarriedoutdidnotassume that triggering of MT3 expression should be in positive correlation with tested compound concentration. The results showed that our compounds are able to influence MT3 expression. It is to be mention that our study is not oriented toward exact mechanism ortoshowexactquantitiesofMT-3protein.Inouropinion,twoof ourcompoundssignificantlyenhancedMT-3proteinandmRNAlevels. Thethreetestedmolecules(STOCK1N-26544,STOCK1N-26929, and STOCK1N-72593) have no severe cytotoxic effects on neural tissue(Figure4).IC50valuesoftestedmoleculesexceededabout10 times the concentration that was needed for induction of MT3 expression (Figure 1). Our goal of the precise experiment is the assessment of IC50 value. The findings also demonstrate that concentrations oftestedcompounds,whichareabletotriggerMT-3synthesis,arenot toxic. The experiments carried are not focused toward inhibition of microglia.Ourcompoundsenhancedapoptosisandnecrosis,butitwas notofsevereeffect.About80%ofcellswerestillviable.Therateof thenecrosistriggeredbytestedcompoundsdidnotexceed4%(only showinga2.12%increase,comparedtothestainedcontrol).Thelargestamountofapoptoticorearlyoncoticcellswasfoundin10nmol/L STOCK1N-72593 after treatment (19.93%; 12.31% increase compared to the stained control). Flow cytometric analysis on apoptosis/necrosis showed that a lowerdose(5nmol/L)inducedahighertoxiceffectwhencompared withhigherdoses 10nmol/L.Thisincreasewasnotthe severeone (onlyabout4%).Epigeneticmechanismsanddifferenttypesofactivationofsignalingpathwaysaresuspectedinthiscase.Aswasshown in other studies, mechanisms of drug-induced cell death are often concentration dependent. Crosstalk between apoptosis, necrosis, and autophagy could be different in different drug concentrations and numbers of apoptotic cells could be attenuated because of some protectiveautophagyeffects(Kemp,2017;Miyoshietal.,2008;Teng etal.,2016;Torres&Horwitz,1998). Accordingtofluorescencestaining,noseriousROSgeneration and no severe decrease in mitochondria numbers or endoplasmic reticulum changes after testtreatment were found. This is very important,(becauseoxidativestress,mitochondrialdysfunction,and endoplasmic reticulum stress have been implicated in betaamyloid neurotoxicity). The above findings were further validated by calculating the binding freeenergy of the docked complexes through molecular dynamics studies.TheMM-PBSAmethodusesthreeenergetictermsinorderto FIGURE4 ExpressionanalysisofMT-3gene.(a)mRNA expressionfoldchangeincelllinestreatedwith0,5,and10nmol/L of selected compounds. (b) Dot blot for MT3. (c) (Protein level of MT3 based on dot blot detection; displayed as mean and standard deviation) 26544 26929 72593 5 nM conc. MT3 b-actin substance 10 nM 5 nM 10 nM 5 nM 10 nM control MT3 protein AUC 5 nM 10 nM 2654426929 72593SV40 0 5000 10000 15000 20000 Gene expression fold change 0 nM 5 nM 10 nM 2654426929 72593 0.75 2.50 5.00 7.50 25.00 50.00 75.00 (a) (b) (c) TABLE1 Binding freeenergy calculation of the tested compounds and the standard controls Ligand Van der Waal energy (kJ/mol) Electrostatic energy (kJ/mol) Polar solvation energy (kJ/mol) SASA energy (kJ/mol) Binding energy (kJ/mol) BDBM50342769 −129.891±5.824 −25.876±5.056 71.608±5.845 −11.920±0.763 −96.078±11.107 BDBM9019 −83.033±9.812 −13.835±4.606 46.691±13.885 −8.855±1.547 −59.033±11.597 BDBM50260394 −101.236±10.190 −42.368±20.609 98.840±35.764 10.603±0.848 −55.367±20.694 STOCK1N-26544 −60.097±41.578 −92.875±62.292 97.052±69.708 −7.644±5.449 −63.564±40.740 STOCK1N-26929 −107.860±7.382 −71.870±14.138 118.127±28.044 −9.691±0.886 −71.294±21.520
8 of 9 | ROY et al. calculate changes in the freeenergy on binding. The g_mmpbsa tool developedbyKumarietal.(2014),Bakeretal.(2001)(http://rashmikumari.github.io/g_mmpbsa/)isusedtocalculatetheMM-PBSAfrom eachcomplexescombinewithGROMACS.Theexperimentwasrun for 1000ps; several thermodynamic parameters (including RMSD, RMSF, SASA, and H-bond) have already been reported (Roy etal., 2015).g_mmpbsfetchesinformationfromtheGROMACStrajectory fileandcalculatesthetotalfree-energyoftheprotein-ligandcomplex, aswellasthefree-energyofproteinandligand,individually.Italsocalculates the potential energy of molecular mechanics and freeenergy of solvation except entropy contribution. Interaction energy for three control molecules with STOCK1N compounds was calculated with the MT-3 receptor, in order to compare it with the active binder. BDBM50342769, BDBM9019, BDBM50260394 binding energies were approximately −96, −59, and −55kJ/mol. If we look into the individual component of predicted free-energy, van der Waals energies were dominant in the BDBM50342769, BDBM50260394 binding with MT-3. Similarly STOCK1N-26929 showed higher van der Waals energy as well as goodbindingfree-energycomparedtoSTOCK1N-26544(lowcontribution of van der Waals energy). This suggests one of the major MT3 binding interactions is governed by the hydrophobic forces. The secondmajorcomponentwaselectrostaticenergy,whichiscomparably higherinSTOCK1Nmoleculesthanincontrols. The overall findings suggest that hydrophobic and electrostatic interaction is imperative for current MT3 ligand interaction. Polar solvation and nonpolar solvation energies are comparable to the standard controls (Table 1). 5 | CONCLUSIONS The current work has made an effort to see the effect of Benzothiazolone-2onthecellularconcentrationofMT-3.ManystudiesshowthatMT-3mRNAisdownregulatedinADbrainsandthat thismight,therefore,contributetotheupsurgeofabnormalneuronal development associated with the disease. Our previous findings suggests that Benzothiazolone-2 possesses better pharmacokinetic and pharmacodynamics properties. It also forms stable complex with MT3 according to molecular dynamics findings. The above findings were validated by screening the compounds against live immortalized human microglia cells (SV40). This tested compound showed neither severed cytotoxicity nor did ittriggernecrosis.Inaddition,therewasnoseriousROS-generation, decreaseinmitochondrialnumbers,stress-inducedendoplasmicreticulum changes after testtreatments.Allthreetestedcompoundsenhanced cellular concentration of MT3 protein in cells and surprisingly alsomRNAexpression. ACKNOWLEDGMENTS This work was supported by the Ministry of Education, Youth and SportsoftheCzechRepublicundertheprojectCEITEC2020(LQ1601) andbySpecificUniversityResearchgrants–MUNI/A/1355/2016and MUNI/A/1401/2016–providedbytheMinistryofEducation,Youth andSportsoftheCzechRepublicintheyear2017. COMPETING FINANCIAL INTERESTS We certify that we have no affiliation with or financial involvementwithanyorganizationorentitywithadirectfinancialorany other interest in the subject matter or materials discussed in the manuscript. REFERENCES Baker,N.A.,Sept,D.,Joseph,S.,Holst,M.J.,&McCammon,J.A.(2001). 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