Modelling Complex Marine Survey Data Using the Darwin Core Data Package
Abstract
Presentation given at Living Data 2025. This repository contains two files: A PowerPoint file with speaker notes in English A PDF version of the slides
Full text
21 October 2025 Yi-Ming Gan, John Wieczorek, Cecilie Svenningsen, Pablo Deschepper, Charlie Plasman, Anton Van de Putte, Tim Robertson Modelling Complex Marine Survey Data Using the Darwin Core Data Package
BROKE-West Fish: introduction https://doi.org/10.1016/j.dsr2.2008.02.015 •Survey •January-March 2006 •Data poor region - CCAMLR Subdivision 58.4.2 of the Southern Ocean •Goal: Baseline assessment Image source: Station grid sampled during BROKE-West https://doi.org/10.1016/j.dsr2.2008.02.015
BROKE-West Fish: introduction https://doi.org/10.15468/nooqmj •1 Occurrence table
BROKE-West Fish •Implementing DwC-DP
BROKE-West Fish: implementing DwC-DP https://doi.org/10.1016/j.dsr2.2008.02.015 Event Survey Survey Target happened during for a
BROKE-West Fish: implementing DwC-DP https://doi.org/10.1016/j.dsr2.2008.02.015 Event Assertion Event Survey Survey Target happened during for a Trawl distance, speed Sampled volume Depth Net opening area Mesh size
BROKE-West Fish: implementing DwC-DP https://doi.org/10.1016/j.dsr2.2008.02.015 Event Assertion Event Occurrence Survey Survey Target Identification happened during happened during for a satisfied for a Trawl distance, speed Sampled volume Depth Net opening area Mesh size
BROKE-West Fish: implementing DwC-DP https://doi.org/10.1016/j.dsr2.2008.02.015 Event Assertion Event Occurrence Survey Survey Target Identification happened during happened during for a satisfied for a Trawl distance, speed Sampled volume Depth Net opening area Mesh size
BROKE-West Fish: implementing DwC-DP https://doi.org/10.1016/j.dsr2.2008.02.015 Individual fish Material Media Material Assertion Trawl distance, speed Sampled volume Depth Net opening area Mesh size
BROKE-West Fish •Implementing DwC-DP •DwC-A limitations •Lessons learned
BROKE-West Fish: lessons learned •Had to join many tables only to split them into DwC-DP tables •Tools for splitting tables would be useful
BROKE-West Fish: lessons learned •It will be extremely difficult to maintain the identifiers (updating dataset)
BROKE-West Fish: lessons learned •Helpful to model complex datasets •Preserve the meaning of data
BROKE-West Fish •Implementing DwC-DP •DwC-A limitations •Lessons learned •Accessing data from DwC-DP 1. Inferring non-detections 2. Length frequency distribution 3. Diet composition
Accessing data from DwC-DP: 1. Inferring non-detections (from detections-only data) https://biodiversity-aq.github.io/broke-west-fish-dwc-dp/explore-dwc-dp.html#non-detections Detections Inferred nondetections Target scope Non-target taxa Humboldt Extension in a nutshell
for a for a Material Assertion Event Assertion Event Occurrence Survey Survey Target Identification happened during happened during for a satisfied for a Material for a evidence for a Media Accessing data from DwC-DP: 1. Inferring non-detections (from detections-only data) https://biodiversity-aq.github.io/broke-west-fish-dwc-dp/explore-dwc-dp.html#non-detections
Accessing data from DwC-DP: 1. Inferring non-detections https://biodiversity-aq.github.io/broke-west-fish-dwc-dp/explore-dwc-dp.html#non-detections
Accessing data from DwC-DP: 2. Fish length frequency distribution EOV Specification Sheet: Fish Abundance and Distribution (Version 2.0) https://goosocean.org/document/17510 accessed 2025-10-07
for a for a for a Material Assertion Event Assertion Event Occurrence Survey Survey Target Identification happened during happened during satisfied for a Material for a evidence for a Media Accessing data from DwC-DP: 2. Fish length frequency distribution
Icons “Fish Catching” icon by kukuh amaliawan, ID, “Sonar”icon by By gravisio, ID, “Fish”icon by Dheana Titaura, ID, “Ruler”icon by rizal2109, ID, “Photo”icon by Alice Design, “Scale”icon by fahmionline, ID, “Energy”icon by Dicky Prayudawanto, ID, “Krill”icon by Phạm Thanh Lộc, VN, “Plus”icon by Aybige, “Jar” icon by Alfonso Juan Dillera, PH, “Digestion”icon by Dio Sugiharto, ID from Noun Project
Thank you! Yi-Ming Gan | [email protected]