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Spartina versicolor Fabre: Another case of Spartina trans-Atlantic introduction?

Castillo Segura, Jesús Manuel; Baumel, Alex; Rousseau-Gueutin, Mathieu; Sapienza-Bianchi, C.; Gareil, Agnès; Duong, N.; Rousseau, H.; Ainouche, M.

Abstract

Intercontinental introductions are widespread in the genus Spartina, with important ecological and evolutionary consequences. The native or introduced status of Spartina species is then critical with regard to biodiversity assessment, especially for vulnerable Mediterranean coastline ecosystems. Spartina versicolor was first recorded in southern France in 1849, then successively in various places on the European and North-African Mediterranean and Atlantic coasts. This species is considered to be either a European native or an invasive species introduced from North America which has a high morphological similarity to the Atlantic American species Spartina patens. We performed extensive sampling of S. versicolor in Europe and North Africa (from natural populations and herbarium collections) and compared these samples to other European and American Spartina species (including S. patens). Chromosome counts were reported for the first time and revealed that S. versicolor is tetraploid (2n = 4x = 40). Phylogenetic analyses based on chloroplast and nuclear ribosomal DNA sequences did not reveal any molecular variation within S. versicolor. In this species, a single haplotype, that is identical to one haplotype of S. patens, was found in the four chloroplast and the nuclear ribosomal ITS regions investigated. In addition, simple sequence repeat markers were used and revealed a low level of genetic diversity within S. versicolor, suggesting that the introduction of S. versicolor occurred from a narrow genetic pool of S. patens from North America. © 2016, Springer International Publishing Switzerland.

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HAL Id: hal-01355664 h ps://hal.science/hal-01355664 Submi ed on 25 Ap 2018 HAL is a mul i-disciplina y open access a chi e o he deposi and dissemina ion o sci- en i ic esea ch documen s, whe he hey a e pub- lished o no . The documen s may come om eaching and esea ch ins i u ions in F ance o ab oad, o om public o p i a e esea ch cen e s. L’a chi e ou e e plu idisciplinai e HAL, es des inée au dépô e à la di usion de documen s scien i iques de ni eau eche che, publiés ou non, émanan des é ablissemen s d’enseignemen e de eche che ançais ou é ange s, des labo a oi es publics ou p i és. Spa ina e sicolo Fab e: Ano he case o Spa ina ans-A lan ic in oduc ion? Alex Baumel, Ma hieu Rousseau-Gueu in, C. Sapienza-Bianchi, Agnès Ga eil, N. Duong, Hélène Rousseau, Oli ie Co i on, Rachid Ami ouche, S. Sciand ello, B. Dua e, e al. To ci e his e sion: Alex Baumel, Ma hieu Rousseau-Gueu in, C. Sapienza-Bianchi, Agnès Ga eil, N. Duong, e al.. Spa ina e sicolo Fab e: Ano he case o Spa ina ans-A lan ic in oduc ion?. Biological In a- sions, 2016, 18 (8), pp.2123-2135. �10.1007/s10530-016-1128-z�. �hal-01355664� INVASIVE SPARTINA Spa ina e sicolo Fab e: Ano he case o Spa ina ans-A lan ic in oduc ion? A. Baumel .M. Rousseau-Gueu in .C. Sapienza-Bianchi .A. Ga eil .N. Duong . H. Rousseau .O. Co i on .R. Ami ouche .S. Sciand ello .B. Dua e .I. Cac¸ado . J. M. Cas illo .M. Ainouche Recei ed: 23 Ma ch 2015 / Accep ed: 20 Ma ch 2016 ÓSp inge In e na ional Publishing Swi ze land 2016 Abs ac In e con inen al in oduc ions a e wide- sp ead in he genus Spa ina, wi h impo an ecolog- ical and e olu iona y consequences. The na i e o in oduced s a us o Spa ina species is hen c i ical wi h ega d o biodi e si y assessmen , especially o ulne able Medi e anean coas line ecosys ems. Spa - ina e sicolo was i s eco ded in sou he n F ance in 1849, hen successi ely in a ious places on he Eu opean and No h-A ican Medi e anean and A lan ic coas s. This species is conside ed o be ei he a Eu opean na i e o an in asi e species in oduced om No h Ame ica which has a high mo phological simila i y o he A lan ic Ame ican species Spa ina pa ens. We pe o med ex ensi e sampling o S. e sicolo in Eu ope and No h A ica ( om na u al popula ions and he ba ium collec ions) and compa ed hese samples o o he Eu opean and Ame ican Spa ina species (including S. pa ens). Ch omosome coun s we e epo ed o he i s ime and e ealed ha S. e sicolo is e aploid (2n=4x=40). Phy- logene ic analyses based on chlo oplas and nuclea ibosomal DNA sequences did no e eal any molec- ula a ia ion wi hin S. e sicolo . In his species, a single haplo ype, ha is iden ical o one haplo ype o S. pa ens, was ound in he ou chlo oplas and he nuclea ibosomal ITS egions in es iga ed. In addi- ion, simple sequence epea ma ke s we e used and e ealed a low le el o gene ic di e si y wi hin S. e sicolo , sugges ing ha he in oduc ion o S. Gues edi o s: Alan G ay and Malika Ainouche/In asi e Spa ina. Elec onic supplemen a y ma e ial The online e sion o his a icle (doi:10.1007/s10530-016-1128-z) con ains supple- men a y ma e ial, which is a ailable o au ho ized use s. A. Baumel N. Duong Aix Ma seille Uni e si e ´, Ins i u Me ´di e ane ´en de Biodi e si e ´e d’Ecologie (IMBE, UMR CNRS, IRD, A ignon Uni e si e ´), Technopo ˆle de l’En i onnemen A bois-Me ´di e ane ´e, BP 80, 13545 Aix-en-P o ence Cedex 04, F ance M. Rousseau-Gueu in C. Sapienza-Bianchi  A. Ga eil H. Rousseau M. Ainouche (&) UMR CNRS 6553 Ecobio, OSUR (Obse a oi e des Sciences de l’Uni e s de Rennes), Uni e si e ´de Rennes 1/Uni e si e ´Eu ope ´enne de B e agne, 35042 Rennes, F ance e-mail: [email p o ec ed] M. Rousseau-Gueu in INRA, UMR 1349, Ins i u de Ge ´ne ´ ique, En i onnemen e P o ec ion des Plan es, 35653 Le Rheu Cedex, F ance O. Co i on Pla e-Fo me de Cy oge ´ne ´ ique Mole ´culai e, INRA, UMR 1349, Ins i u de Ge ´ne ´ ique, En i onnemen e P o ec ion des Plan es, 35653 Le Rheu Cedex, F ance R. Ami ouche Uni e si e ´des Sciences e de la Technologie Houa i Boumediene, Labo a oi e de Biologie e Physiologie des O ganismes, BP 32 El-Alia, 16111 Bab-Ezzoua , Alge , Alge ia 123 Biol In asions (2016) 18:2123–2135 DOI 10.1007/s10530-016-1128-z e sicolo occu ed om a na ow gene ic pool o S. pa ens om No h Ame ica. Keywo ds Co dg ass Gene ic di e si y Species s a us Medi e anean Mic osa elli es Phylogeny In oduc ion We land habi a s a e among he mos h ea ened in he Medi e anean as a consequence o in ense u baniza- ion, an h opogenic dis u bance and inc eased numbe o in asi e axa (Me ´dail and Ve laque 1997). In F ance, Medi e anean we lands a e among he habi- a s ha a e he mos colonized by in asi e species (Ve laque e al. 2002). Because su eys o biodi e si y a e gene ally poo ly coo dina ed in he Medi e anean biodi e si y ho spo (Ma ignani e al. 2014), in e ence o he na i e o in oduced plan species s a us is no i ial. This s a us is an essen ial pa ame e o biodi e si y managemen and conse a ion biology. I also ep esen s c i ical in o ma ion wi h ega d o popula ion and species e olu iona y his o y. Es ab- lishing na i e s a us o a species in a gi en egion is no an easy ask and equi es a combina ion o di e en app oaches o elucida e he o igin, mode o o ma ion and biogeog aphy o he conside ed axon. The inc eased oppo uni ies o long-dis ance human- media ed species dispe sal make hese esea ches e en mo e complex (Kowa ik 2003). In his con ex , molecula ma ke s and e olu iona y gene ics p o ide impo an insigh o ace back popula ion, species o igin and mig a ion his o y (Mansion e al. 2008; Ha dion e al. 2014). In Spa ina (co dg asses), ecu en in e con inen al in oduc ion e en s and biological in asions a e pa ic- ula ly common and well-documen ed (Daehle and S ong 1996a,b;SanLe ´on e al. 1999;Baumele al. 2001;Sanche ´z-Gullon 2001; Ay es e al. 2004;Ane al. 2007;Ainouchee al.2009; Campos e al. 2004; Lona d e al. 2010; Saa ela 2012; S ong and Ay es 2013). This g ass genus (Poaceae, Chlo idoideae) ep esen s a well- suppo ed monophyle ic lineage (Baumel e al. 2002; Fo une e al. 2007) closely ela ed o some membe s o he pa aphyle ic Spo obolus genus and Calamo il a (Pe e son e al. 2014). I is composed o abou 15 pe ennial species ha ha e di e si ied mos ly in he New Wo ld (Mobbe ley 1956). In oduc ion o species ou side hei na i e ange o e he pas 150 yea s has accele a ed di e si ica ion by acili a ing hyb idiza ion wi h na i e species, in og ession o specia ion, esul - ing in se e al supe imposed di e gen genomes ha coexis in he species cu en ly ound in he wild (Ainouche e al. 2012). The basic (haploid) ch omosome numbe in Spa ina is conside ed o be x=10 (Ma chan 1968), and all species eco ded o da e a e polyploid, anging om e aploids o dodecaploids. Molecula phylogenies om nuclea and chlo oplas DNA sequences ha e indica ed ha genus Spa ina has e ol ed h ough wo main lineages including e aploid and hexaploid species espec i ely (Baumel e al. 2002). The e aploid lineage is composed o species na i e o he New Wo ld, colonising coas al o inland sal ma shes om ei he No he n (Spa ina pa ens,Spa - ina bake i, Spa ina g acilis,Spa ina cynuso oides, Spa ina pec ina a)o Sou he n(Spa ina cilia a, Spa ina a undinacea) hemisphe es. The e aploid S. a gen inensis (syn. S. spa inae), which has a disjunc dis ibu ion in No h-Cen al Ame ica and in Sou h- Ame ica, is sis e o he hexaploid lineage. This la e clade is composed o Spa ina ma i ima,Spa ina al e ni lo a,andSpa ina oliosa, all colonizing low ma sh zones. Spa ina ma i ima, na i e o he Wes e n Eu ope and A ican A lan ic coas s, isone o he ew Old Wo ld na i e species wi h ecen axa o hyb id o igin and he con o e sial S. e sicolo (see below). Acci- den al o delibe a e in oduc ions lead o a ious hyb idiza ion e en s wi hin o be ween he e aploid and hexaploid lineages ( e iewed in Ainouche e al. 2012; S ong and Ay es 2013). In Eu ope, in oduc ions o he hexaploid S. al e ni lo a, na i e o he A lan ic Ame ican coas s and i s subsequen hyb idiza ion wi h hexaploid S. S. Sciand ello Depa men o Biological, Geological and En i onmen al Sciences, Uni e si y o Ca ania, ia Alongo 18, 95125 Ca ania, I aly B. Dua e I. Cac¸ado MARE – Ma ine and En i onmen al Sciences Cen e, Facul y o Sciences o he Uni e si y o Lisbon, Campo G ande, 1749-016 Lisbon, Po ugal J. M. Cas illo Depa amen o de Biologı ´a Vege al y Ecologı ´a, Facul ad de Biologia, Uni e sidad de Se illa, Apa ado 1095, 41080 Se ille, Spain 2124 A. Baumel e al. 123 ma i ima led o he o ma ion o wo s e ile F1 hyb ids in Sou he n England (S. x ownsendii) and in Sou h- wes F ance (S. x ney au ii). Genome duplica ion in he B i ish hyb id esul ed in he igo ous and e ile allododecaploid S. anglica (Hubba d 1968; Gue ´ne ´gou e al. 1988; G ay e al. 1990; G ay e al. 1991). This species apidly expanded in ange and sp ead na u ally o wes e n Eu opean sal ma shes. I is now in oduced in a ious con inen s, leading o a ious a emp s o con ol o e adica e he species (e.g. Hacke e al. 2001; Co e e al. 2007). In oduced S. al e ni lo a is p og essing along he wes e n A lan ic coas s o F ance and Spain (Baumel e al. 2003; Campos e al. 2004). Ano he in oduced Spa ina species in Eu ope is he na i e Sou h-Ame ican hep aploid species S. densi lo a (Fo une e al. 2008) ha is in ading Medi e anean sal ma shes o he Ibe ian peninsula (Bo olus 2006; Cas illo e al. 2008), whe e i hyb idized wi h he hexaploid S. ma i ima (Cas illo e al. 2010). In he wes e n Medi e anean, damp dep essions in dune habi a s a e colonized by Spa ina e sicolo Fab e (Fig. 1) ha g ows also in b ackish ma shes in he A lan ic Coas o he Sou hwes Ibe ian Peninsula. This species, also named Spa ina juncea o Spa ina du ieui (Che alie 1923; Sain -Y es 1932), had a con o e sial axonomic s a us. I was ini ially eco ded almos simul aneously in se e al Medi e - anean places: i s in Sou he n F ance nea Agde (Fab e 1849), hen in I aly (Pa la o e 1848–1850), Alge ia (Cosson and Maisonneu e 1867), and Po u- gal (Da eau 1897). In 1901, Ney au de ec ed his axon on he Sou hwes F ench A lan ic coas , nea A cachon (Cos e 1906). Since hen, S. e sicolo has es ablished all along he wes e n Medi e anean coas s: in Co sica (Jeanmonod and Bu de 1989) as well as on he A lan ic and Medi e anean coas s o he Ibe ian Peninsula (Sanche ´z-Gullo ´n2001). S. e sicolo was conside ed as ei he a na i e Medi e anean plan (e.g. Sanche ´z-Gullo ´n2001; Giuliano and S anisci 2010; Tison e al. 2014a,b), o an in asi e species in oduced om Ame ica (Sanz Elo za e al. 2004; Tison and de Foucaul 2014). Based on mo phological simila i ies, Mobbe ley (1956) conside ed S. e si- colo as synonymous o S. pa ens, assuming ha he Medi e anean popula ions we e in oduced om he A lan ic No h Ame ican coas whe e S. pa ens is abundan in high ma sh and dunes. Recen s udies on sal ma shes along he Spanish A lan ic coas ha e unde lined he p esence o S. pa ens in Eu ope (San Leon 1999; Page e al. 2010) and enewed in e es in he s a us o S. e sicolo . P ie o e al. (2011) examined h ee S. e sicolo indi iduals om no h- e n Spain (As u ias) using In e nal ansc ibed Space (ITS) sequences o nuclea ibosomal DNA genes, and compa ed hese sequences o hose ini ially published in genus Spa ina by Baumel e al. (2002) and Fe is e al. (unpublished). These indi iduals exhibi ed simila ITS sequence o S. pa ens, which led hese au ho s o sugges ha S. e sicolo should be conside ed as S. pa ens. Bu i canno be excluded ha a na i e Medi e anean Spa ina species exis s besides he in oduc ion o S. pa ens in Spain. Cases o c yp ic in asion ha e al eady been documen ed in he ecen his o y o Spa ina (e.g. Bo olus e al. 2015) and can be di icul o de ec (Val uena e al. 2011). Fig. 1 Spa ina e sicolo a igo ous popula ion om Vieux Salins (Hye ` es, F ance) bmi o ic ch omosomes coun e s ained wi h DAPI (2n =40), ba ep esen s 5 lm Spa ina e sicolo Fab e: Ano he case o Spa ina ans-A lan ic in oduc ion? 2125 123 In his s udy, we aim a answe ing he ollowing ques ions: Is S. e sicolo Fab e om Eu ope con- speci ic wi h S. pa ens om No h Ame ica and i so is Eu opean S. pa ens ano he case o ans-A lan ic in oduc ion in o Eu ope? As highligh ed abo e, wo ldwide in asions o Spa ina a e common phe- nomena and he Medi e anean coas may be one o he a ious places whe e Ame ican Spa ina ha e se led a e dispe sal by ships du ing he 18 h o 19 h cen u ies. Gaining insigh in o he na i e o in oduced s a us o S. e sicolo , o i s ela ionship wi h o he Spa ina species will be o c i ical impo ance in o de o be e unde s and he biogeog aphy and di e si i- ca ion o Spa ina species, as well as o de e mine he conse a ion p io i y le el and managemen policy o S. e sicolo in he Old Wo ld. To answe hese ques ions, popula ions o S. e sicolo sampled om a ious Medi e anean and A lan ic si es in Eu ope and No h-A ica (including e e ence ypes om he ba ia) a e analyzed using cy ogene ic and molec- ula (mic osa elli e, nuclea and chlo oplas DNA sequences) da a, and compa ed o No h-Ame ican Spa ina species. Ma e ials and me hods Plan ma e ial Fi y-se en indi iduals o S. e sicolo we e sampled om nume ous Medi e anean si es (n =47) and om he ba ium collec ions (n =10) (Table S1). The analyzed samples include specimens om a ious popula ions in F ance (including Co sica), I aly, Po ugal, Spain and Alge ia as well as he i s S. e sicolo plan s om Agde (F ance) disco e ed by Fab e (1849). Eigh Spa ina pa ens samples we e ob ained om he A lan ic No h Ame ican coas (Table S1). Rep esen a i es om eigh o he Spa ina species (S. a gen inensis,S. al e ni lo a,S. a undi- nacea,S. bake i,S. densi lo a,S. oliosa,S. ma i ima and S. pec ina a) and om Spo obolus c yp and us we e addi ionally in oduced in phylogene ic analyses. Ch omosome coun s The ch omosome numbe o S. e sicolo was de e - mined on mi o ic ch omosomes ob ained om wo plan s collec ed in F ance (Vieux Salins and Sain - Louis du Rhone). Mi o ic ch omosomes we e obse ed on me aphasic cells isola ed om oo ips. The oo s ips o 0.5–1.5 cm leng h we e ea ed wi h 0.04 % 8-hyd oxiquinoline o 2 h a 4 °C in he da k ollowed by 2 h a oom empe a u e o accumula e me aphases, hen ixed in e hanol-ace ic acid (3:1, / ) o 12 h a 4 °C and s o ed in e hanol 70 % a -20 °C. A e washing in 0.01 M enzyme bu e (ci ic acid- sodium ci a e pH 4.5) o 15 min, he oo s we e diges ed in a solu ion o 5 % Onozuka R-10 cellulase (Sigma) and 1 % Y23 pec olyase (Sigma) a 37 °C o 30 min. The oo ips we e hen washed wi h dis illed wa e o 30 min. Roo ips ans e ed on a slide we e squashed in a d op o 3:1 e hanol-ace ic acid ixa ion solu ion. A e ai -d ying, slides we e s ained wi h 4,6- diamidino-2-phenylindole (DAPI). Fluo escence images we e cap u ed using a CoolSnap HQ came a (Pho ome ics, Tucson, A iz) on an Axioplan 2 mic oscope (Zeiss, Obe kochen, Ge many) and anal- ysed using Me aVue TM (Uni e sal Imaging Co po a- ion, Downing on, PA). DNA isola ion, PCR ampli ica ion and DNA sequencing Genomic DNA was isola ed om 100 mg o esh (o 30 mg o he ba ium) lea es om each indi idual using he NucleoSpin Ò Plan II Ki (Mache ey– Nagel), ollowing ins uc ions p o ided by he man- u ac u e . DNA concen a ions we e es ima ed using he Nanod op Spec opho ome e ND 1000 (The mo Fische Scien i ic). Fou chlo oplas and en nuclea egions we e ampli ied. Chlo oplas sequences we e chosen among he mos a iable in e genic egions iden i ied in Poaceae (Rousseau-Gueu in e al. 2015) o wi hin Spa ina (Blum e al. 2007; Kim e al. 2013): i included he ndhC- nV, pe A-psbJ (p ime s designed om Rousseau-Gueu in e al. 2015), and he nL- nF and nT- nL in e genic egions (Tabe le e al. 1991). Nuclea egions included In e nal ansc ibed Space s (ITS) o nuclea ibosomal genes ( DNA) (Whi e e al. 1990) and nine mic osa elli e ma ke s (SSR 6, 40, 44, 72, 109, 122, 161, 172, 188) iden i ied om S. ma i ima Bac e ial A i icial Ch omosome end sequences (Fe ei a de Ca alho e al. 2013). The p ime sequences used in his s udy a e indica ed in Table S2. 2126 A. Baumel e al. 123 Ampli ica ions o chlo oplas and ITS egions we e ca ied ou using he high ideli y KOD polyme ase (Toyobo, No agen) in a o al olume o 50 ll. The eac ion mix included 1X o KOD bu e , 1.5 mM MgSO4, 0.2 mM dNTP, 0.3 lM o each p ime , 0.02 U o KOD polyme ase, and 20 ng empla e DNA. Cycling condi ions we e 94 °C o 2 min, ollowed by 32 ounds o 94 °C o 20 s, 59.5 °C o 10 s and an ex ension a 70 °C o 15 s. Chlo oplas and nuclea (ITS) PCR p oduc s we e pu i ied using he PCR Clean-up Gel ex ac ion ki (Mache ey–Nagel) and he pu i ied p oduc s we e sen o Mac ogen Eu ope (Ams e dam, Ne he lands) o di ec sequencing. Long PCR p oduc s ( om he nT- nL, nL- nF and ndhC- nV egions) we e sequenced om bo h sides. Sequences we e cleaned and e i ied isually on he ch oma og ams (no double peaks obse ed). Simple Sequence Repea (SSR) de ec ion was pe o med o 60 samples (52 Old Wo d S. e sicolo and 8 New Wo ld S. pa ens) using 9 mic osa elli e loci. Ampli ica ions o all mic osa elli es we e pe - o med in 20 lL ha con ained 10 ng DNA, 4 lLo 5X bu e , 4 mM MgCl2, 0.2 mM dNTPs, 0.4 lMo each p ime , and 0.4 uni s o Taq polyme ase (Q- Biogen) in a PTC-200 G adien The mal Cycle (MJ Resea ch), ollowing ouchdown PCR p o ocols (Miglio e e al. 2013). The 50ends o he o wa d p ime s we e labelled wi h PET o NED. The luo es- cen ly labelled PCR p oduc s we e dilu ed (1/40) and we e sepa a ed by capilla y elec opho esis, wi h a 500 bp size s anda d (LIZ500), using an ABI P ism Ò 3730xl (Applied Biosys ems) au oma ic sequence . Alleles we e sized using PEAK SCANNER 1.0 so wa e (Applied Biosys ems). Geno yping (PCR and elec opho esis) was epea ed o 8 samples o e i y he ep oducibili y o he peak pa e ns. Phylogene ic analyses The da a ma ices gene a ed o indi idual o con- ca ena ed chlo oplas egions as well as he nuclea ITS ma ix we e ob ained a e aligning all sequences using Geneious (D ummond e al. 2010) and adjus ing hem manually. These ma ices we e i s subjec ed o phylogene ic analyses using maximum pa simony. Sequence da a we e analyzed using PAUP* 4.0b10 (Swo o d 2001) wi h heu is ic sea ch and he de aul sea ch op ions. The phylogene ic analyses we e pe - o med using sequences om Spo obolus c yp and us, a closely ela ed species o Spa ina (Pe e son e al. 2014) as ou g oup. Boo s ap analyses we e pe o med wi h 1000 eplica es (Felsens ein 1985). In addi ion, hese da a ma ices we e subjec ed o Maximum Likelihood phylogene ic analyses. The bes - i ed model o sequence e olu ion o each egion (indi idual o conca ena ed) was de e mined by using JModel es (Posada 2008) implemen ed in MEGA 5.0 (Tamu a e al. 2011). Maximum likelihood analyses we e hen pe o med o each ma ix using PhyML (Guindon and Gascuel 2003), wi h 1000 eplica es o boo s ap. Mic osa elli e analyses Ou o he nine SSR loci, six we e conside ed o be eliable and we e subsequen ly analyzed. A e com- pa isons o eplica es, all dubious peaks we e emo ed. Since mos geno ypes ha e a leas h ee alleles in his polyploid species (see below), SSR ma ke s we e analyzed as bina y da a and he ma ix o allele size was con e ed in o p esence/absence da a ma ix. Genalex 6.51 so wa e (Peakall and Smouse 2006) was used o sea ch o ma ching geno ypes, bea ing e idence o iden ical clones. The sea ch o ma ching geno ype was epea ed accoun ing o one, wo o h ee allelic e o s. Allelic accumula ion cu es we e pe o med (specaccum unc ion, egan R pack- age, Oksanen e al. 2013) o ma ch allelic ichness o S. e sicolo and S. pa ens. S uc u e o gene ic di e si y was analyzed using mul i a ia e analyses o ade4 and adegene packages o R (D ay and Du ou 2007; Jomba 2008). P incipal coo dina e analysis (PcoA, dudi.pco unc ion, ade4 R package) was based on Jacca d dis ances (Jacca d 1901) compu ed on SSR p esence/absence (dis .bina y unc ion, ade4 R package). Fo ma ching samples ha ing iden ical geno ypes (clones), only one geno- ype was kep in analyses based on indi idual geno- ypes and hese we e iden i ied as ‘‘clones’’ on he PcoA plo . A disc iminan analysis was conduc ed on he co ela ion o allele p esence/absence o dis in- guish gene ic g oups acco ding o he clus e ing p ocedu e designed by Jomba e al. (2010) (DAPC analysis, adegene R package). Finally, allele equen- cies wi hin hese g oups we e used o compu e Nei dis ances (Nei 1972) and o build a Neighbo Joining ne wo k o explo e ela ionships be ween DAPC Spa ina e sicolo Fab e: Ano he case o Spa ina ans-A lan ic in oduc ion? 2127 123 gene ic g oups (nj unc ion, ape R package, Pa adis e al. 2004). Resul s Ch omosome coun s e ealed ha in bo h analyzed popula ions, S. e sicolo indi iduals ha e 2n =40 ch omosomes (Fig. 1b), indica ing ha his axon is a e aploid species. No sequence he e ogenei y was obse ed in ei he chlo oplas o nuclea (ITS) sequences. In a-genomic polymo phism migh be expec ed in polyploid nuclea genomes, bu he ITS egions (belonging o he DNA gene amily) seem o ha e unde gone conce ed e olu ion as p e iously ound in o he Spa ina species (Baumel e al. 2002; Bou e e al. 2015). Maximum Pa simony (MP) analyses we e pe o med using he ndhC- nV (601 bp), pe A-psbJ (470 bp), nL- nF (577 bp), nT- nL (631 bp), chlo oplas conca ena ed (2278 bp) o nuclea ibosomal ITS (457 bp) ma ices. These analyses esul ed in 23, 34, 20, 23, 3 and 19 equal mos pa simonious ees. In hese analyses, S. e sicolo , S. pa ens and S. bake i always belonged o he same clade (Fig. 2). Fo he mos esol ed ee co esponding o he ITS egions, hese h ee species belong o a well-suppo ed clade (99 %) and a e as posi ioned as a sis e clade o S. a undincacea and S. densi lo a (100 % boo s ap suppo ). The sequences ob ained om all S. e si- colo (including he sequences ob ained by P ie o e al. 2011) and S. pa ens samples we e iden ical, apa om a single subs i u ion obse ed in one accession o S. pa ens (Cheesequake s a e Pa k, Flo ida) o he ndhC- nV egion. S. e sicolo and S. pa ens a e closely ela ed o S. bake i, p esen ing only wo subs i u ions (one o he ndhC- nV and one o he ITS egions). Since simila ee opologies we e ob ained using Maximum Likelihood, only he MP ees a e p esen ed he e. Thi y-se en alleles we e eco ded o e he six SSR loci. All SSR geno ypes we e he e ozygous wi h mos ly 3 o 4 alleles pe locus. Wi hin S. e sicolo , sea ch o ma ching geno ypes e ealed 35 geno ypes among 52 samples, 31 being unique and 4 being epea ed om 4 o 11 imes. These iden ical geno ypes a e e e ed as ‘‘clones’’. Accoun ing o one, wo o h ee allele e o s we ound 41, 44 and 50 ma ching geno ypes in S. e sicolo , whe eas no ma ching geno ypes we e ound among he 8 samples o S. pa ens e en accoun ing o 3 allele e o s. Accumu- la ion cu e (Fig. 3) accoun ing o he unequal sampling be ween S. e sicolo (n =52) and S. pa ens (n =8) e ealed highe allelic di e si y in S. pa ens han in S. e sicolo : i.e. o 6 samples 32 alleles we e encoun e ed in S. pa ens agains 26 in S. e sicolo (Fig. 3). The PcoA analysis based on Jacca d dis ances compu ed be ween indi idual geno ypes (Fig. 4) e ealed ha he main s uc u e is due o di e en ia ion be ween 6 ou o 8 S. pa ens geno ypes. The o he 2 S. pa ens samples a e mo e simila o S. e sicolo geno ypes. He ba ium specimens a e sca e ed among S. e sicolo geno ypes, excep one (collec ed in Ca non, F ance, in 1880 by Jou e) ha is g ouped wi h S. pa ens (H6, Fig. 4). The he ba ium specimen collec ed by Fab e in (1849)inAgdehasoneo he geno ypes eco ded on many indi iduals (‘‘ma ching geno ypes’’ see Ma e ials and me hods) and iden i ied as clone ‘‘b’’ (Fig. 4). This clone is ound in F ance, Basque a ea, I aly and Sicily. Acco ding o he DAPC analysis (Fig. 4) and NJ ne wo k (Fig. 5), he SSR geno ypes we e op imally clus e ed in six g oups. The gene ic clus e numbe 4 ( ep esen ed in g een, Figs. 5, 6) was composed o Eu opean samples om F ance (na u al popula ions and mos he ba ium samples), I aly, Co sica, and No h Spain. The indi iduals om he sou he n Ibe ic Peninsula (sou h o Spain and Po ugal) and Alge ia a e g ouped in wo (1 and 6) closely ela ed clus e s. Th ee gene ic clus e s could be dis inguished in he Ame ican samples o S. pa ens:(1) Mexico-Flo ida-Delawa e (2) New Je sey and (3) New- Je sey Hampshi e. The he ba ium sample om F ance sampled in Ca non (He aul ) was assigned in a g oup wi h S. pa ens (Mexico-Flo ida-Delawa e g oup). c Fig. 2 Molecula phylogeny o Spa ina based on chlo oplas (andhC- nV: 601 bp; bpe A-psbJ: 470 bp, c nL- nF: 577 bp, d nT- nL: 631 bp, econca ena ed sequences: 2278 bp) o nuclea ibosomal ITS sequences (457 bp) using he maximum pa simony me hod. Fo each phylogeny, one o he equally pa simonious ees ha is opologically iden ical o he 50 % majo i y- ule consensus ee (pe A-psbJ: 34 equally pa simonious ees; conca ena ed chlo oplas sequences: h ee equally pa simo- nious ees; ITS: 19 equally pa simonious ees) o he 50 % majo i y- ule consensus ee (ndhC- nV: 23 pa simonious ees; nL- nF: 20 pa simonious ees) is p esen ed. The boo s ap pe cen ages (1000 eplica es) a e shown in bold abo e he b anches and he numbe o changes is indica ed below. The ee is oo ed using ei he Spo obolus c yp and us o So ghum bicolo 2128 A. Baumel e al. 123 5 S. bake i S. pa ens (New Je sey, USA) S. e sicolo (Ba ayo, As u ias, Spain) S. pec ina a S. a undinacea S. densi lo a S. al e ni lo a S. ma i ima Spo obolus c yp and us S. oliosa S. pa ens (Tamaulipas, Mexico) S. pa ens (New Hampshi e, USA) S. pa ens (Cheesequake s a e, New Je sey, USA) S. pa ens (Flo ida Deso o Pa k, Flo ida, USA) S. pa ens (Delawa e, USA) S. pa ens (Bay iew a enue, New Je sey, USA) S. e sicolo (Ped ena, Can ab e, Spain) S. e sicolo (O u , As u ias, Spain) S. e sicolo (Pan ano, Sicily, I aly) S. e sicolo (Boudigou de To eilles, Py énées o ien ales, F ance) S. e sicolo (Kouali, Tipaza, Alge ia) S. e sicolo (Les A esquie s, Hé aul , F ance) S. e sicolo (Po Sain Louis, Bouches du Rhône, F ance) S. e sicolo (E ang des Pesquie s, Va , F ance) 99 70 16 16 6 3 1 21 1 1 7 9 8 2 100 6 93 92 5 F S. e sicolo (P ie o e al. 2011; JN133292) S. e sicolo (P ie o e al. 2011; JN133290) S. e sicolo (P ie o e al. 2011; JN133291) 99 80 4 22 3 3 2 5 27 3 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3 S. bake i S. pa ens (New Je sey, USA) S. pec ina a S. a undinacea S. densi lo a S. al e ni lo a S. ma i ima So ghum bicolo S. pa ens (Cheesequake s a e, New Je sey, USA) S. pa ens (Flo ida Deso o Pa k, Flo ida USA) S. pa ens (Delawa e, USA) S. e sicolo (Pan ano, Sicily, I aly) S. e sicolo (Boudigou de To eilles, Py énées o ien ales, F ance) S. e sicolo (Kouali, Tipaza, Alge ia) S. e sicolo (Les A esquie s, Hé aul , F ance) S. e sciolo (Po Sain Louis, Bouches du Rhône, F ance) S. e sciolo (Vieux salins, Va , F ance) S. e sicolo (Guadiana i e , Andalusia, Spain) S. e sciolo (Banda bianca, Co sica, F ance) S. e sicolo (Tagus es ua y, Po ugal) S. e sicolo (G ande mo e, Hé aul , F ance) S. e sciolo (E ang des Pesquie s, Va , F ance) S. pa ens (Chissahowi zka, Flo ida, USA) A S. bake i S. pa ens (New Je sey, USA) S. pec ina a S. a undinacea S. densi lo a S. al e ni lo a S. ma i ima Spo obolus c yp and us S. pa ens (Cheesequake s a e, New Je sey, USA) S. pa ens (Flo ida Deso o Pa k, Flo ida, USA) S. pa ens (Delawa e, USA) S. e sciolo (Bou digou de To eilles, Py énées o ien ales, F ance) S. e sicolo (Kouali, Tipaza, Alge ia) S. e sicolo (Les A esquie s, Hé aul , F ance) S. e sicolo (Po Sain Louis, Bouches du Rhône, F ance) S. e sicolo (Vieux salins, Va , F ance) S. e sicolo (Guadiana i e , Andalusia, Spain) S. e sicolo (Banda bianca, Co sica, F ance) S. e sicolo (Tagus es ua y, Po ugal) S. e sicolo (G ande mo e, Hé aul , F ance) S. e sicolo (E ang des Pesquie s, Va , F ance) S. pa ens (Chissahowi zka, Flo ida, USA) S. pa ens (Tamaulipas, Mexico) S. pa ens (New Hampshi e, USA) S. pa ens (Bay iew a enue, New Je sey, USA) S. e sicolo (Ped ena, Can ab e, Spain) S. e sciolo (O u , As u ias, Spain) S. e sicolo (Pan ano, Sicily, I aly) S. e sicolo (Ba ayo, As u ias, Spain) S. e sicolo (Eb o i e , Andalusia, Spain) S. e sicolo (Aspe illo dunes, Andalusia, Spain) S. e sicolo (Roche, Andalusia, Spain) S. e sicolo (Pan ano, Sicily, I aly) S. oliosa 1 64 1 1 1 1 1 1 5 3 65 96 B S. bake i S. pa ens (Tamaulipas, Mexico) S. pec ina a S. al e ni lo a Spo obolus c yp and us S. pa ens (New Je sey, USA) S. pa ens (New Hampshi e,USA) S. pa ens (Cheesequake s a e, New Je sey, USA) S. pa ens (Flo ida Deso o Pa k, Flo ida, USA) S. e sicolo (Aspe illo dunes, Andalusia, Spain) S. e sicolo (Roche, Andalusia, Spain) S. e sicolo (Pan ano, Sicily, I aly) S. e sicolo (Bou digou de To eilles, Py énées o ien ales, F ance) S. e sicolo (Kouali, Tipaza, Alge ia) S. e sicolo (Banda bianca, Co sica, F ance) S. oliosa S. ma i ima S. densi lo a S. g acilis S. a undinacea 67 3 1 1 2 7 4 3 2 2 3 88 C S. bake i S. pec ina a S. a undinacea S. densi lo a S. al e ni lo a S. ma i ima Spo obolus c yp and us S. pa ens (Cheesequake s a e, New Je sey, USA) S. e sciolo (Bou digou de To eilles, Py énées o ien ales, F ance) S. e sicolo (Kouali, Tipaza, Alge ia) S. e sicolo (Les A esquie s, Hé aul , F ance) S. e sicolo (Po Sain Louis, Bouches du Rhône, F ance) S. e sicolo (Vieux salins, Va , F ance) S. e sicolo (Guadiana i e , Andalusia, Spain) S. e sicolo (Tagus es ua y, Po ugal) S. e sicolo (G ande mo e, Hé aul , F ance) S. e sicolo (E ang des Pesquie s, Va , F ance) S. e sicolo (Ped ena, Can ab e, Spain) S. e sciolo (O u , As u ias, Spain) S. e sicolo (Pan ano, Sicily, I aly) S. e sicolo (Eb o i e , Andalusia, Spain) S. e sicolo (Aspe illo dunes, Andalusia, Spain) S. e sicolo (Roche, Andalusia, Spain) S. e sicolo (Pan ano, Sicily, I aly) S. oliosa 1 1 1 2 2 1 1 2 4 9 53 91 94 D S. bake i S. pa ens (Cheesequake s a e, New-Je sey USA) S. e sicolo (Bou digou de To eilles, Py énées o ien ales, F ance) S. pec ina a S. a undinacea S. densi lo a S. al e ni lo a S. ma i ima So ghum bicolo 100 85 67 66 54 68 85 12 5 6 9 3 3 3 3 2 1 1 1 0 E Spa ina e sicolo Fab e: Ano he case o Spa ina ans-A lan ic in oduc ion? 2129 123 The S. pa ens clus e being he mos simila o S. e sicolo (NJ ne wo k Fig. 6) is obse ed all along he A lan ic No h Ame ican coas om Mexico o Delawa e. The clus e 4 which has mos o he S. e sicolo samples, and he he ba ium sample collec ed by Fab e, a e he mos simila o S. pa ens acco ding o he NJ ne wo k (Fig. 6). Discussion Ou esul s e eal ha S. e sicolo is a e aploid species wi h 40 ch omosomes, as ound in S. pa ens (Ma chan 1968) and no Eu opean o No h-A ican popula ions analyzed can be di e en ia ed gene ically om No h Ame ican S. pa ens samples as hey exhibi simila DNA ITS and cpDNA sequences. In his monog aph o Spa ina, Mobbe ley (1956) s essed he mo phological simila i ies be ween hese wo axa, al hough se e al pheno ypes we e desc ibed o S. pa ens (Mobbe ley 1956). Ou esul s suppo he hypo hesis ha all Eu opean and A ican popula ions o S. e sicolo a e in ac No h Ame ican S. pa ens in oduced be o e o a he beginning o he nine- een h-cen u y. Al hough some mic osa elli e a ia ion was de ec ed be ween S. pa ens and S. e sicolo , only ew geno ype di e ences we e obse ed. Gene ic di e ences ega d- ing mic osa elli e alleles would mos likely esul om in aspeci ic gene ic di e si y in S. pa ens- e sicolo popula ions; his is suppo ed by gene ic simila i ies be ween some No h-Ame ican S. pa ens and S. e sicolo samples as can be seen on PcoA esul s (Fig. 4). The in oduc ion o igin could be in he a eas co e ed by he gene ic clus e 4 (Fig. 5), i.e. F ance, No h Spain o I aly because he co esponding geno- ype is he mos simila o S. pa ens in he NJ ne wo k (Fig. 6). This pa e n is also clea in he PcoA analysis (Fig. 4). The S. e sicolo samples om Po ugal and Sou h Spain, o Alge ia a e ei he de i ed om his in oduc ion o esul ed om a second in oduc ion. Spa ina pa ens is a highly a iable hizoma ous species, exhibi ing high ecological ampli ude along he A lan ic coas o No h Ame ica om Canada o Cen al Ame ica, colonizing high sal ma sh zones, beaches and sand dunes, wi h a iable seed se (Silande and An ono ics 1979). Allozyme s udies in na i e S. pa ens popula ions (Silande 1984) e ealed impo an polymo phism wi h a dec eased ole o ege a i e ep oduc ion om dune o ma sh habi a s. In con as mic osa elli e geno yping e ealed educed gene ic di e si y in S. e sicolo compa ed o No h Ame ican S. pa ens samples (Fig. 3), which is consis- en wi h a gene ic bo leneck ollowing in oduc ion in Eu ope oge he wi h he p edominan clonal p opaga ion o he in oduced plan s. Indeed we ound 17 ma ching SSR geno ypes wi hin S. e sicolo bu his numbe inc eased o 41 when accoun ing o one allele e o indica ing ha gene ic a ia ion wi hin S. e sicolo could be mainly o somaclonal a ia ion. P elimina y su eys in S. e sicolo popula ions e ealed s e ile pollen (R. Ami ouche, unpublished da a), which is in ag eemen wi h he obse a ion ha his axon a ely p oduces seeds (Fab e 1849; San Leon e al. 1999; Tison e al. 2014; ou pe sonal obse a ions). Fu he sampling and phylogeog aphic analyses a e needed in he na i e egion o S. pa ens o be e documen he his o y o his axon and o iden i y he p ecise popula ions ha we e in oduced in he Medi e anean. Al hough a ious s udies ha e documen ed dis ibu ion, ecology and plas ici y o S. pa ens in No h Ame ica (e.g. F asco and Good 1982; Bu dick and Mendelssohn 1987; Bu dick e al. 1989; Foo e and Reynolds 1997; Lona d e al. 2010), e y ew s udies ha e documen ed gene ic di e si y in S. pa ens (e.g. Wu 2012) and he e is a g ea need o de elop DNA-based analyses a he genome le el in he na i e ange o his species, which plays an impo an ecological ole, p e en ing coas al e osion and being used in dune es o a ion. Samples Alleles 123456 20 25 30 35 40 S. pa ens Fig. 3 Ra e ac ion cu es o allelic di e si y o he se en SSR loci 2130 A. Baumel e al. 123