Generation of a genetically modified chimeric plasmodium falciparum parasite expressing plasmodium vivax circumsporozoite protein for malaria vaccine development

Generation of a Genetically Modified Chimeric Plasmodium falciparum Parasite Expressing Plasmodium vivax Circumsporozoite Protein for Malaria Vaccine Development Yukiko Miyazaki 1‡ , Catherin Marin-Mogollon 1‡ , Takashi Imai 1,2 , Anto ´nio M. Mendes 3 , Rianne van der Laak 4 , Angelika Sturm 4 , Fiona J. A. Geurten 1 , Shinya Miyazaki 1 , Severine Chevalley-Maurel 1 , Jai Ramesar 1 , Surendra K. Kolli 1 , Hans Kroeze 1 , Roos van Schuijlenburg 1 , Ahmed M. Salman 5 , Brandon K. Wilder 6 , Arturo Reyes-Sandoval 5 , Koen J. Dechering 4 , Miguel Prude ˆncio 3 , Chris J. Janse 1 , Shahid M. Khan 1† and Blandine Franke-Fayard 1 * 1 Department of Parasitology, Leiden University Medical Center, Leiden, Netherlands, 2 Department of Infectious Diseases and Host Defense, Gunma University Graduate School of Medicine, Maebashi, Japan, 3 Instituto de Medicina Molecular João Lobo Antunes, Faculdade de Medicina, Universidade de Lisboa, Lisboa, Portugal, 4 TropIQ Health Sciences, Nijmegen, Netherlands, 5 The Jenner Institute, Nuffield Department of Medicine, University of Oxford, Oxford, United Kingdom, 6 Vaccine and Gene Therapy Institute, Oregon Health and Science University, Portland, Oregon, United States Chimeric rodent malaria parasites with the endogenous circumsporozoite protein (csp)gene replaced with csp from the human parasites Plasmodium falciparum (Pf)andP. vivax (Pv)are used in preclinical evaluation of CSP vaccines. Chimeric rodent parasites expressing PfCSP have also been assessed as whole sporozoite (WSP) vaccines. Comparable chimeric P. falciparum parasites expressing CSP of P. vivax could be used both for clinical evaluation of vaccines targeting PvCSP in controlled human P. falciparum infections and in WSP vaccines targeting P. vivax and P. falciparum. We generated chimeric P. falciparum parasites expressing both PfCSP and PvCSP. These Pf-PvCSP parasites produced sporozoite comparable to wild type P. falciparum parasites and expressed PfCSP and PvCSP on the sporozoite surface. PfPvCSP sporozoites infected human hepatocytes and induced antibodies to the repeats of both PfCSP and PvCSP after immunization of mice. These results support the use of Pf-PvCSP sporozoites in studies optimizing vaccines targeting PvCSP. Keywords: malaria, Plasmodium falciparum,Plasmodium vivax, circumsporozoite protein (CSP), chimeric parasites, vaccines INTRODUCTION Plasmodium falciparum (Pf) and P. vivax (Pv) are two major human malaria parasites that threaten public health, mainly in tropical areas. Malaria parasites are transmitted by Anopheles mosquitoes where they develop into infectious sporozoites that reside in the salivary glands. After a bite of an infected mosquito, sporozoites enter the blood stream of the mammalian host and migrate to the Frontiers in Cellular and Infection Microbiology | www.frontiersin.org December 2020 | Volume 10 | Article 5910461 Edited by: Nicolas Blanchard, INSERM U1043 Centre de Physiopathologie de Toulouse Purpan, France Reviewed by: Georgina Nuri Montagna, Consejo Nacional de Investigaciones Cientı ´ficas y Te ´cnicas (CONICET), Argentina Giulia Costa, Max Planck Institute for Infection Biology, Germany *Correspondence: Blandine Franke-Fayard [email protected] † Deceased ‡ These authors have contributed equally to this work Specialty section: This article was submitted to Parasite and Host, a section of the journal Frontiers in Cellular and Infection Microbiology Received: 03 August 2020 Accepted: 11 November 2020 Published: 17 December 2020 Citation: Miyazaki Y, Marin-Mogollon C, Imai T, Mendes AM, van der Laak R, Sturm A, Geurten FJA, Miyazaki S, Chevalley-Maurel S, Ramesar J, Kolli SK, Kroeze H, van Schuijlenburg R, Salman AM, Wilder BK, Reyes-Sandoval A, Dechering KJ, Prude ˆncio M, Janse CJ, Khan SM and Franke-Fayard B (2020) Generation of a Genetically Modified Chimeric Plasmodium falciparum Parasite Expressing Plasmodium vivax Circumsporozoite Protein for Malaria Vaccine Development. Front. Cell. Infect. Microbiol. 10:591046. doi: 10.3389/fcimb.2020.591046 ORIGINAL RESEARCH published: 17 December 2020 doi: 10.3389/fcimb.2020.591046 liver where they invade hepatocytes. Inside hepatocytes, parasites replicate to form thousands of daughter merozoites, which are released into the blood and invade erythrocytes. The preerythrocytic stages of Plasmodium parasites, i.e. sporozoites and liver stages, are attractive targets of leading malaria vaccine candidates, including RTS,S, the most advanced subunit vaccine against P. falciparum tested in Phase III clinical trials (Kester et al., 2009;Cohen et al., 2010;Agnandji et al., 2012;Olotu et al., 2016). RTS,S is based on the circumsporozoite protein (CSP), a major surface protein expressed by Plasmodium sporozoites and early liver stages which plays a critical role in sporozoite formation, invasion of mosquito salivary glands and invasion of host hepatocytes (Menard, 2000;Sinnis and Coppi, 2007;Coppi et al., 2011). This protein contains a highly conserved central repeat region flanked by Nand C -terminal regions. B-cell responses to PfCSP target predominantly the protein’s central NANP repeat region, generating antibodies capable of protecting animal models from Plasmodium infection and NANP antibodies induced by RTS,S immunization are associated with clinical protection (White et al., 2013;Foquet et al., 2014;Sack et al., 2014;Triller et al., 2017). CSP from P. vivax also contains an immunogenic central repeat region with two major PvCSP alleles, VK210 and VK247 considered as important targets for a vaccine (Yadava and Waters, 2017). So far pre-erythrocytic subunit vaccines targeting CSP, including RTS,S, have shown low to modest protective efficacy in clinical trials and in field studies (Agnandji et al., 2015;Hoffman et al., 2015;Clemens and Moorthy, 2016;Long and Zavala, 2016;Olotu et al., 2016;Healer et al., 2017;Mahmoudi and Keshavarz, 2017) emphasizing the need to improve CSP-based vaccination approaches which requires efficient preclinical and clinical evaluation of different vaccines. Clinical evaluation of P. falciparum vaccines is greatly aided by the ability to vaccinate individuals and then examine vaccine efficacy in controlled human malaria infections (CHMI) (Sauerwein et al., 2011;Spring et al., 2014;Bijker et al., 2016;Stanisic et al., 2018). Although CHMI for P. vivax has been developed (Arevalo-Herrera et al., 2016;Bennett et al., 2016;Payne et al., 2017;Hall et al., 2019), the lack of a continuous in vitro culture system for P. vivax blood stages limits theavailabilityofP.vivaxsporozoitesforclinicalhumaninfections. In addition, since P. vivax forms dormant hypnozoites in the liver, which can causing infection relapses, safe and effective means for clearance of hypnozoites are essential for P. vivax CHMI studies (Payne et al., 2017). In multiple preclinical studies, the evaluation of the efficacy of CSP-based vaccines and anti-CSP antibodies has been performed using chimeric rodent malaria parasites expressing CSP from either P. falciparum or P. vivax (Espinosa et al., 2013;Gimenez et al., 2017;Salman et al., 2017;Vijayan et al., 2017;de Camargo et al., 2018;Marques et al., 2020). The availability of comparable chimeric P. falciparum parasites expressing PvCSP would permit the analysis of protective efficacy of PvCSP-based vaccines in clinical studies using P. falciparum-based CHMI, bypassing the need for P. vivax sporozoite production and hypnozoite elimination. However, in contrast to efficient PvCSP expression and sporozoite production in chimeric rodent parasites, we found that chimeric P. falciparum lines with the PfCSP gene replaced by PvCSP, failed to produce salivary gland sporozoites, indicating that PvCSP cannot fully complement the role of PfCSP in P. falciparum sporozoite formation (Marin-Mogollon et al., 2018). To develop chimeric P. falciparum sporozoites expressing PvCSP, we therefore aimed at generating a chimeric P. falciparum line expressing both the endogenous PfCSP and an engineered PvCSP. It has been shown that introducing the P. falciparum csp gene as an additional copy into the genome of the rodent parasite P. berghei (Pb) results in development of viable and infective sporozoites, expressing both PbCSP and PfCSP in pre-erythrocytic stages (Mendes et al., 2018a; Mendes et al., 2018b;Reuling et al., 2020). We used CRISPR/Cas9 gene editing to introduce a chimeric Pvcsp gene, containing repeats of both the VK210 and VK247 alleles, into the Pfp47 locus of the P. falciparum NF54 genome. We found that these Pf-PvCSP chimeric P. falciparum parasites produced viable, motile sporozoites expressing both PfCSP and chimeric PvCSP at the sporozoite surface that are infectious to primary human hepatocytes. Immunization of mice with these sporozoites resulted in induction of antibodies against the repeats of both PfCSP and chimeric PvCSP. These results not only show promise for the use of Pf-PvCSP sporozoites in clinical CHMI studies for optimization of vaccines targeting PvCSP, but also suggest that such chimeric sporozoites can be used in whole, attenuated sporozoite vaccination approaches, capable of inducing crossprotective immune responses against both P. falciparum and P. vivax. MATERIALS AND METHODS In Vitro Cultivation of P. falciparum Blood Stages Wild type P. falciparum NF54 (WT NF54) parasites (Ponnudurai et al., 1981) were obtained from the Radboud University Medical Center (Nijmegen, The Netherlands). Parasites were cultured in RPMI-1640 culture medium supplemented with L-glutamine and 25mM HEPES (Gibco Life Technologies), 50 mg/L hypoxanthine (Sigma), 0.225% NaHCO 3 and 10% human serum at a 5% hematocrit under 4% O 2 ,3%CO 2 and 93% N 2 gas-conditions at 75 rpm at 37°C in a semi-automated culture system (Infers HT Multitron and Watson Marlow 520U) as previously described (Mogollon et al., 2016). Fresh human serum and human red blood cells (RBC) were obtained from the Dutch National Blood Bank (Sanquin Amsterdam, the Netherlands; permission granted from donors for the use of blood products for malaria research and microbiology tested for safety). Production of genetically modified parasites and characterization of these parasites throughout their life cycle, including mosquito transmission, was performed under GMO permits IG 17-230_II-k and IG 17-135_III. Laboratory Animals and Ethics Statement Female C57BL/6Jico mice (6–7 weeks; Charles River, NL) were used. All animal experiments were granted a licence by the Competent Authority after an advice on the ethical evaluation by the Animal Miyazaki et al. Chimeric P. falciparum Expressing P. vivax CSP Frontiers in Cellular and Infection Microbiology | www.frontiersin.org December 2020 | Volume 10 | Article 5910462 Experiments Committee Leiden (AVD1160020171625). All experiments were performed in accordance with the Experiments on Animals Act (Wod, 2014), the applicable legislation in the Netherlands and in accordance with the European guidelines (EU directive no. 2010/63/EU) regarding the protection of animals used for scientific purposes. All experiments were performed in a licenced establishment for the use of experimental animals (LUMC). Mice were housed in individually ventilated cages furnished with autoclaved aspen woodchip, fun tunnel, wood chew block and nestlets at 21 ± 2°C under a 12:12 h light-dark cycle at a relative humidity of 55 ± 10%. Anopheles Rearing Mosquitoes from a colony of Anopheles stephensi (line Nijmegen SDA500) were used. Larval stages were reared in water trays at a temperature of 28 ± 1°C and a relative humidity of 80%. Adult females were transferred to incubators with a temperature of 28 ± 0.2°C and a relative humidity of 80%. For the transmission experiments, 3to 5-day-old mosquitoes were used. Generation of the Chimeric Pf-PvCSP Parasites Chimeric P. falciparum parasites expressing both PfCSP and chimeric PvCSP (PvCSP-chi), were generated using the previously described pLf0019 construct (Mogollon et al., 2016) (Figure S1), containing the cas9 gene, together with the gRNAdonor DNA containing plasmid, pLf0109, targeting Pfp47 which contains the Pvcsp-chi expression cassette. The pLf0019 construct contains a blasticidin (bsd) drug-selectable marker cassette and the pLf0109 gRNA-donor DNA construct contains a hdhfr-yfcu drugselectable marker cassette for selection with WR99210 and 5fluorocytocine (5-FC)(Figure S1). To generate pLf0109, the plasmid pLf0047 (Marin-Mogollon et al., 2019), containing two homology regions and a gRNA expression cassette targeting Pfp47 (PF3D7_1346800), was modified by introducing a Pvcsp-chi expression cassette, which was commercially synthesized (Integrated DNA Technologies, Inc.; see Figure S2). This Pvcspchi expression cassette contains a codon-optimized Pvcsp open reading frame (ORF) containing the Nand C-terminal regions of the Pvcsp VK210 allele that flank a chimeric repeat sequence comprising repeats of both the VK210 allele (three times the repeat GDRADGQPA/GDRAAGQPA) and the VK247 allele (three times the repeat ANGAGNQPG/ANGAGDQPG). The ORF of Pvcsp-chi is flanked by EcoRV/EcoRI restriction sites and cloned into pLf0040 (cut EcoRV/EcoRI) (Marin-Mogollon et al., 2018) which contains 967bp of the promoter regions of Pfcsp (PF3D7_0304600) and 917bp of 3’UTR of Pfcsp resulting in intermediate plasmid T24 (Figure S1). This plasmid was digested with ApaI/SacII to obtain the complete Pvcsp-chi expression cassette containing the Pfcsp promoter, the Pvcsp-chi ORF with the chimeric VK210/VK247 repeats, and the Pfcsp 3’UTR. This expression cassette was inserted into vector pLf0047 (Figure S1) using the same restriction enzymes (ApaI/SacII) resulting in the final construct pLf0109. Plasmids for transfection were isolated from 250 ml cultures of Escherichia coli XL10-Gold Ultracompetent Cells (Stratagene, NL) by maxi-prep (PureYield™Plasmid Maxiprep System (Promega, NL) to generate 25–50 µg of DNA used per transfection. Transfection of WT PfNF54 parasites was performed using the ‘spontaneous uptake method’as previously described (Miyazaki et al., 2020). Briefly uninfected RBC (300 mlof packed RBCs) were transfected with the constructs pLf0019 and pLf0109 (a mixture of 25 mg of each circular plasmid in 200 ml cytomix)usingtheGenePulserXcellelectroporator(BioRad) witha single pulse (310 V, 950 mF). Subsequently, the transfected RBCs were washed with complete RPMI1640 medium and mixed with WT PfNF54 infected RBC (iRBC) with a parasitemia of 0.5% and a hematocrit of 5%. These cells were transferred into a 10 ml culture flask and the cultures were maintained under standard conditions in the semi-automated culture system (Mogollon et al., 2016). Selection of transfected parasites was performed by applying double-positive drug pressure from day 3 after transfection using the drugs WR99210 (2.6nM) andBSD (5 µg/ml). The positive drug pressure was maintained until parasites were detectable in thin blood-smears (at day 15 after transfection). Subsequently, the parasites were maintained in drug-free medium for 2–4 days until the parasitemia reached over 10%, followed by applying negative selection by addition of 5-FC (1 µM) as described before (Mogollon et al., 2016) in order to eliminate parasites that retained the donor DNA construct as episomal plasmid and to enrich for the transfected parasites containing the donor DNA integrated into the genome. Negative drug pressure in the cultures was maintained until thin blood-smears were parasite-positive (after 7 days). After the negative selection, iRBC were harvested from cultures for genotyping by diagnostic PCR and Southern blot analysis. Subsequently, selected parasites were cloned by limiting dilution as previously described (Marin-Mogollon etal.,2018). Briefly, serial dilutions were performed with uninfected RBC in complete medium (1% hematocrit and 20% serum) and cultured in a total volumeof100µlincubatedin96-wellplates,resultingin8rowswith the following numbers of iRBC per well: 100, 10, 5, 2.5, 1.25, 0.6, 0.3, 0.15. Plates were incubated in a Candle Jar at 37°C and culture medium was changed every other day. Every 5 days RBC were added resulting in an increase of the hematocrit from 1% to 5%. At days 10 to 11, samples were collected for thick smear analysis from the rows with the highest numbers (100 and 10) of iRBC/well. At day 21 thick smears were made from samples from all rows. Clones were selected from dilutions/row with less than 40% of the wells being parasite-positive. These clones were transferred in 10 ml cultureflasksat5%hematocrit understandard cultureconditionsin the semi-automated culture system for collection of parasites for further genotype and phenotype analyses (see next section). Genotyping of Pf-PvCSP Parasites Diagnostic PCR and Southern blot analysis of digested DNA were performed from material isolated from iRBC obtained from 10 ml cultures, pelleted by centrifugation (1500 g, 5 min). RBC were then lysed with 5 ml of cold (4°C) erythrocyte lysis buffer (10× stock solution 1.5 M NH 4 Cl, 0.1 M KHCO 3 ,0.01M Na 2 EDTA;pH7.4;(Janse et al., 2006)) and parasites were treated with proteinase-K before DNA isolation by standard Miyazaki et al. Chimeric P. falciparum Expressing P. vivax CSP Frontiers in Cellular and Infection Microbiology | www.frontiersin.org December 2020 | Volume 10 | Article 5910463 phenol-chloroform methods. Correct integration of the donor construct was analyzed by long-range PCR (LR-PCR) (primers P1/P3) and standard PCR amplification of the Pvcsp-chi gene (primers P4/P5), the Pfp47 gene (primers P6/P7) and the fragment for 5’integration (5’int; primers P1/P2). The PCR fragments were amplified using KOD Hot start polymerase following standard conditions with an annealing temperature of 52°C for 15 s, 55°C for 15 s, and 63°C for 25 s and an elongation step of 68°C for 4 min for LR-PCR and with an annealing temperature of 50°C for 10 s, 55°C for 10 s, and 60°C for 10 s and an elongation step of 68°C for 1 min for the other PCRs. Southern blot analysis was performed with genomic DNA digested with HpaIandEcoRI (4 h at 37°C) to confirm integration of the replacement of the Pfp47 gene by the Pvcsp-chi expression cassette. Digested DNA was hybridized with probes targeting the Pfp47 homology region 1 (HR1), amplified from WT PfNF54 genomic DNA by PCR using the primers P8/P9 and a second probe targeting ampicillin (Amp) gene, amplified from plasmid pLf0109 by PCR using the primers P10/P11. Phenotype analysis Pf-PvCSP parasites: blood stages, gametocytes, oocysts, and sporozoites The growth rate of asexual blood stages of the Pf-PvCSP was determined in 10 ml cultures maintained in the semi-automated culture system under standard culture conditions. Briefly, a culture with 0.1% parasitemia was established in complete culture medium at a hematocrit of 5%. Medium was changed twice daily and the culture was maintained for a period of 3 days without refreshing RBC. For determination of the course of parasitemia, triplicate samples of 100 µl were collected daily from all cultures and cells pelleted by centrifugation (9485 g; 30 s) and stained with Giemsa. P. falciparum gametocytes cultures were generated using standard culture conditions as previously described (Marin-Mogollon et al., 2018) with some modifications. Briefly, parasites from asexual stage cultures were diluted to a final parasitemia of 0.5%, and cultures were followed during 14 days without adding new RBC. At day 14, gametocyte development was analyzed by counting male/female gametocytes (stage V) in Giemsa stained blood smears. To assess exflagellation, 20 µl samples of the P. falciparum gametocyte cultures at day 14 were diluted 1:1 with Fetal Calf Serum (FCS) at room temperature and exflagellation centers were examined and quantified 10–20 min after activation in a Bürker cell counter. For analysis of oocyst and sporozoite production, A. stephensi mosquitoes were fed when cultures contained mature stage V gametocytes and showed more than 80 exflagellating parasites per 10 5 erythrocytes. Mosquito feeding was performed using the standard membrane feeding assay (SMFA) (Ponnudurai et al., 1989). Oocysts were analyzed between day 10 and 12 and salivary gland sporozoites were counted at day 18 and 21 after feeding. Oocyst were counted in 10–30 midguts, dissected in a droplet of mercurochrome (1%) in distilled water on a glass slide. Midguts were covered with a coverslip and oocyst images were recorded from dissected midgut in PBS 1 X (100× magnification). For counting sporozoites, salivary glands from 30–60 mosquitoes were dissected and homogenized using a grinder in 100 µl of RPMI pH 7.2 and sporozoites were analyzed in a Bürker cell counter using phase-contrast microscopy. Analysis of PvCSP-chi and PfCSP Expression in Sporozoites To analyze CSP expression in fixed Pf-PvCSP and WT PfNF54 salivary gland sporozoites by indirect immunofluorescence assay (IFA), samples of purified salivary gland sporozoites (20 µl) were placed on a 8-well black cell-line diagnostic microscope slide (Thermo Scientific, NL), dried for 10 min, and fixed with 4% paraformaldehyde for 30 min at room temperature. After fixation the slides were washed three times with PBS and permeabilized with 20 µl of 0.5% triton in PBS and then blocked with 10% of FCS in PBS for 1h. Fixed cells were washed with PBS and incubated overnight at 4°C with the following monoclonal CSP antibodies: mouse anti-PfCSP (mAb 2A10, MRA-183; 1:200 dilution of 1 mg/ml stock solution); mouse anti-PvCSP VK210 (mAb 2F2; MRA-184; (Salman et al., 2017); 1:200 dilution of 109 µg/ml stock solution) and mouse anti-PvCSP VK247 (mAb 2E10.E9; MRA-185; (Salman et al., 2017); 1:200 dilution of 125 µg/ml stock solution. Subsequently, cells were rinsed three times with PBS and incubated with the secondary antibodies Alexa FLuor®488/594-conjugated chicken anti-mouse (Invitrogen Detection technologies, NL at 1:500 dilution). Finally, the cells were washed again three times with PBS and stained with the DNA-specific dye Hoechst-33342 at a final concentration of 10 µM. Fixed cellswere covered with 1–2dropsofan anti-fadingagent (Image-iT™FX, Life technologies), and a coverslip placed on the cells and sealed with nail polish. Stained cells were analyzed for fluorescence using a Leica fluorescence MDR microscope (100× magnification). Pictures were recorded with a DC500 digital camera microscope using Leica LAS X software with the following exposure times: Alexa 488: 1.0 s; Alexa 594: 0.6 s; Hoechst 0.2 s; bright field 0.62 s (1× gain) or with a Leica SP8 upright confocal microscope. To analyze CSP expression of live Pf-PvCSP and WT PfNF54 salivary gland sporozoites by indirect immunofluorescence assay (IFA), samples of 2 × 10 5 salivary gland sporozoites were aliquoted in 1.5 ml Eppendorf tubes and were incubated with the corresponding antibody (mouse anti-PfCSP, mouse antiPvCSP VK210 or mouse anti-PvCSPVK247 (1:100 dilution) in 100 µl of 1% (v/v) FCS in PBS 1×, for 1 h on ice. Subsequently, sporozoites were rinsed with 1.5 ml of 1% (v/v) FCS in PBS and pelleted by centrifugation at 9300 g for 4 min at 4°C. The sporozoite pellet was then resuspended in 100 µl 1% FCS in PBS containing the secondary antibodies; anti–mouse IgG Alexa 488 (1:200) and incubated for 1 h on ice. Sporozoites were rinsed with 1.5 ml of 1% (v/v) FCS in PBS and pelleted by centrifugation at 9300 g for 4 min at 4°C, and the resulting pellet was resuspended in 40 µl of PBS. Of the cell suspension containing sporozoites 20 µl was placed per well of an 8-well black cell-line diagnostic microscope slide (Thermo Scientific), incubated 30 min at room temperature (RT), and fixed with 80 µl of 4% PFA in PBS 1× for 30 min at RT. Finally, the wells were washed twice with PBS and stained with 10 µM Hoechst 33342 in PBS for 15 min at RT. For microscopy analysis, the preparations were Miyazaki et al. Chimeric P. falciparum Expressing P. vivax CSP Frontiers in Cellular and Infection Microbiology | www.frontiersin.org December 2020 | Volume 10 | Article 5910464 covered with 1–2 drops of an anti-fading agent (Image-iT™FX, Life technologies), and a coverslip was placed onto the cells and sealed with nail polish. Stained cells were analyzed for fluorescence using a Leica fluorescence MDR microscope (100× magnification). Pictures were recorded with a DC500 digital camera microscope using Leica LAS X software with the following exposure times: Alexa 488: 0.7 s; Hoechst 0.136 s; bright field 0.62 s (1× gain). Sporozoite Gliding Assay Sporozoite motility was determined using a sporozoite gliding assay (Stewart and Vanderberg, 1988;van Schaijk et al., 2008). Glass slides were placed in a 24 wells plate (Thermofisher, DK) and coated with an anti-PfCSP monoclonal 3SP2 (courtesy of Dr. M. McCall, Radboudumc, The Netherlands; 5 mg/ml in PBS) using 200 µl per slide, and left overnight at RT. The next day freshly isolated WT PfNF54 and Pf-PvCSP sporozoites, collected in RPMI (Thermofisher, Gibco 42401-018) with 10% FCS (Capricornscientific, FBS-12A CP15-1439) at RT were added to anti-PfCSP coated slides that were washed with PBS. Per slide 30.000 sporozoites were added (in 200 µl RPMI with 10% FCS) and these glass slides were incubated for 2.5 h at 37°C under 5% CO 2 conditions. Slides were then washed three times with PBS and fixed with 4% PFA (Thermo Scientific, NL) for 20 min at RT. Then, the slides were washed three times with PBS and blocked with 1% BSA (Roche diagnostic, DE) in PBS for 15 min. After BSA blocking, the slides were washed three times with PBS, and the primary antibody anti-Pf-3SP2 or anti-PvCSP-VK210 Mab (mAb 2F2) (10 µg/ml) was added and incubated for 45 min at RT. Slides were then washed three times with PBS, and incubated with a secondary antibody goat anti-mouse Alexa fluor 488 (Invitrogen Thermofisher, Oregon, A11001) Mab (diluted 500 times in PBS) for 45 min (RT, in the dark). Finally, slides were washed three times with PBS in the dark, air dried until the slides were almost dry and mounted with Coverslips (with Image iT FX signal Enhancer; Invitrogen Thermofisher, USA) and examined with a Leica DMR fluorescent microscope with standard GFP filter for the gliding trails at 63× magnification. The percentage of gliding was calculated in 8–10 fields, measuring the number of gliding trails for the WT PfNF54 sporozoites in comparison with the gliding trails for the Pf-PvCSP sporozoites. The mean and standard deviation were determined for the percentage of gliding trail sporozoites. In Vitro Infection of Primary Human Hepatocytes by Sporozoites In vitro primary human hepatocyte maturation assay was performed as described in (Marin-Mogollon et al., 2019) with few adaptations. Cryopreserved primary human hepatocytes, obtained from Xenothech, were thawed according to the manufacturer and seeded at a density of 60,000 cells/well in a collagen-coated 96-well clear-bottomed black plate for 2 days. Medium was refreshed daily (hepatocyte medium: Williams’sE medium supplemented with 10% heat inactivated fetal bovine serum, 1% penicillin-streptomycin, 1% fungizone, 0.1 lU/ml insulin, 70 µM hydrocortisone). Per well, 7 x 10 4 freshly dissected Pf-PvCSP and WT PfNF54 sporozoites were added to the hepatocyte monolayer. After a quick spin (10 min at 1900 g), the plate was incubated at 37°C under 5% CO2. The medium was replaced with fresh hepatocyte culture medium 3 h postinvasion, and daily for 4 days thereafter. Then, hepatocytes were fixed with ice-cold methanol for at least 10 min on ice. A standard IFA was performed using an anti-PfHSP70 primary antibody (StressMarq) with an Alexa fluor 594 (Invitrogen) secondary antibody and DAPI for nuclear staining. High content imaging was performed, using the ImageXpress Pico system (Molecular Devices). Number of parasites, number of hepatocytes and size of parasites were determined using the CRX software (Molecular Devices) and data analyzed using the GraphPad software. Rodent Immunization With Sporozoites and Antibody Production For generation of sporozoite-extracts for immunization, salivary gland sporozoites were isolated as described in the previous sections. Aliquots of 10 5 sporozoites in 50 µl PBS were made and stored at −80°C. After two rounds of freezing and thawing, 10 5 sporozoites in 200 µl PBS were used to immunize mice by intravenous injection. Groups of six C57BL/6 mice were immunized three times with sporozoites at a 7-day interval, and blood was collected in heparinized capillaries from all mice by orbitalveinpuncture1dayprior tothefirst and third immunization and one week after the last immunization. Plasma was collected after centrifugation of the blood samples (1500 g for 8 min at 4°C) and stored at −20°C until further analysis. For assessment of anti-CSP antibody titers (total IgG), enzyme-linked immunosorbent assays (ELISAs) were performed. High protein-binding capacity 96-well ELISA plates (Nunc MaxiSorp™flat-bottom) were coated with synthetic peptides (Sigma) based on the repeat sequences of PfCSP and PvCSP. Specifically, plates were coated with peptides with the amino acid sequence (NANP)4NVDPC for PfCSP, the amino sequence GD RAD GQP AGD RAA GQP A for the PvCSP VK210 and the amino sequence ANGAGNQPG ANGAGDQPG for the PvCSP VK247. The plates were coated overnight at 4°C with a peptide concentration of 5 µg/ml in PBS with a volume of 50 µl per well. Plates were washed three times with 0.05% Tween20/BS (PBST) and blocked with 200 µl of PBST with 5% milk for 30 min at RT. Plates were then washed one additional time and plasma samples were diluted 1:50 in 1% milk PBST and a 3-point 1:3 dilution was carried out for each sample. After 3h incubation at RT, plates were washed three times with PBST and incubated for 1h at RT with the secondary antibody, horseradish peroxidase-labelled goat anti-mouse IgG (GE Healthcare UK) at a dilution of 1:2000. After six PBST washes, the reaction was developed by adding BD OptEIA™TMB Substrate Reagent and incubating for 1 to 5 min at RT, before stopping the reaction by adding 50 µl Stop solution (2N H 2 SO 4 ). Absorbance was immediately measured at 450 nm using a Tecan Infinite M200 plate reader. Data were analyzed in relation to a standard titration curve of at least 8 points starting a dilution of 1.5u/ml Miyazaki et al. Chimeric P. falciparum Expressing P. vivax CSP Frontiers in Cellular and Infection Microbiology | www.frontiersin.org December 2020 | Volume 10 | Article 5910465 of the corresponding mouse monoclonal antibody: mouse antiPfCSP (mAb 2A10, MRA-183); mouse anti-PvCSP VK210 (mAb 2F2; MRA-184) and mouse anti-PvCSP VK247 (mAb 2E10.E9; MRA-185). All monoclonal antibodies were produced from hybridoma cell lines obtained from BEI Resources, NIAID, and kindly provided by Elizabeth Nardin. Statistics Data were analyzed using GraphPad Prism software version 8.1.1 (GraphPad Software, Inc). Significance difference analyses between WT PfNF54 and Pf-PvCSP lines were performed using the unpaired Student’s t-test. The value of p < 0.05 was considered statistically significant (*p < 0.01, ** p < 0.001, *** p < 0.0001). RESULTS Generation of Chimeric Plasmodium falciparum Sporozoites Expressing PfCSP and Chimeric PvCSP We have previously shown that chimeric P. falciparum parasites with the Pfcsp gene replaced by the two major Pvcsp alleles, VK210 and VK247, do not produce salivary gland sporozoites and most oocysts degenerate before formation of sporozoites (MarinMogollon et al., 2018). It has been shown that viable and infectious rodent P. berghei sporozoites can be engineered to express CSP proteins from two different Plasmodium species. These chimeric sporozoites were generated by introducing a P. falciparum csp gene as an additional copy into the P. berghei genome (Mendes et al., 2018a;Mendes et al., 2018b;Reuling et al., 2020). Based on this observation we aimed at generating chimeric P. falciparum sporozoites expressing both PfCSP and an chimeric PvCSP protein (PvCSP-chi). Using CRISPR/Cas9 gene editing, a chimeric P. falciparum line (Pf-PvCSP) was created that contains the Pvcsp-chi gene under the control of 967 bp of the Pfcsp gene promoter region. This expression cassette was introduced into the neutral Pfp47 locus (PF3D7_1346800) of the genome of P. falciparum NF54 wild type (WT) parasites. The Pfp47 locus was selected as it is suitable for introducing transgenes without compromising parasite developmentin the blood and liver stages or in A. stephensi mosquitoes (Talman et al., 2010;Vaughan et al., 2012;Vos et al., 2015;Marin-Mogollon et al., 2019;Miyazaki et al., 2020). The WT PfNF54 parasites were transfected with two plasmids: a previously described construct containing the Cas9 expression cassettewiththeblasticidin (bsd) drug-selectable marker cassette (pLf0019) and a donor DNA construct (pLf0109) designed to target the Pfp47 locus. The donor construct contains the Pvcsp-chi expression cassette flanked by two homology regions of Pfp47,thePfp47 sgRNA sequence and a hdhfr-yfcu drugselectable marker cassette (see Figures 1A,S1,S2 and Materials and Methods section for details of the generation of the constructs). This Pvcsp-chi gene contains the Nand Cterminal regions of the Pvcsp VK210 allele that flank a chimeric repeat sequence comprising repeats of both the VK210 allele (three times the repeat GDRADGQPA/ GDRAAGQPA) and the VK247 allele (three times the repeat ANGAGNQPG/ANGAGDQPG). Transfection of WT PfNF54 parasites was performed using the ‘spontaneous uptake method’. Briefly, uninfected RBC were first transfected with the constructs pLf0019 and pLf0109. Subsequently, the transfected RBCs were mixed with WT PfNF54 infected RBC (iRBC). Selection of transfected parasites containing both plasmids was performed by applying double-positive selection with the drugs Blasticidin and WR99210 until parasites were detectable by thin blood-smear analysis. Subsequently negative drug selection with 5fluorocytosine was applied to enrich the parasites in which the Pvcsp-chi gene expression cassette was integrated into the genome by double cross-over homologous recombination. Next drug-selected parasites were cloned by limiting dilution. Diagnostic (long range) PCR and Southern analyses of three clones (Pf-PvCSPcl1,cl3,and cl4) confirmed correct double crossover integration of the Pvcsp-chi gene expression into the Pfp47 locus in the genome of all Pf-PvCSP clones (Figures 1B, C). Two Pf-PvCSP clones (cls 1, 3) were selected for further phenotype characterization. Pf-PvCSP Parasites Produce Sporozoites in Anopheles stephensi Mosquitoes The in vitro growth of Pf-PvCSP (cl3) blood stages was comparable to that of the parental WT PfNF54 blood stage parasites (Figure 1D). Pf-PvCSP parasites produced numbers of mature gametocytes in standardized gametocyte cultures similar to those of the parental line (Table 1;Figure S3) and male gametocytes underwent exflagellation upon activation. Using SMFA, A. stephensi mosquitoes were infected with gametocytes of either WT PfNF54 or Pf-PvCSP parasites. The number of oocysts in mosquito midguts was determined at days 10 to 12 after infection and the number of sporozoites in salivary glands was analyzed at days 18 to 24 after infection. These analyses revealed that Pf-PvCSP parasites produced comparable number of oocysts and salivary gland sporozoites to those of the parental parasites (Table 1;Figures S3 and S4). Approximately 90% of PfPvCSP oocysts already contained sporozoites at days 10 to 12 which is in contrast to the two previously created chimeric P. falciparum lines with the Pfcsp gene replaced by the Pvcsp alleles vk210 and vk247. Most of the oocysts of these replacement lines degenerated before the formation of sporozoites (MarinMogollon et al., 2018). The presence of Pf-PvCSP sporozoites in salivary glands (Table 1)indicatedthatPfCSP retains its normal function in the formation of sporozoites, and that expression of PvCSP-chi in these sporozoites does not appear to interfere with sporozoite formation and invasion of salivary glands. Pf-PvCSP Sporozoites Express PfCSP As Well As PvCSP-chi on Their Surface To analyze the expression of PvCSP-chi and PfCSP in salivary gland sporozoites of the Pf-PvCSP line, we first performed an immunofluorescence on fixed/permeabilized sporozoites with antibodies specific for the repeat sequences of either PvCSP VK210, PvCSP VK247 or PfCSP. All Pf-PvCSP sporozoites analyzed (n=2 exp.) reacted with all three antibodies whereas WT PfNF54 sporozoites reacted only with anti-PfCSP antibodies (Figure 2), indicating that all Pf-PvCSP sporozoites expressed both the PfCSP and PvCSP-chi proteins. Miyazaki et al. Chimeric P. falciparum Expressing P. vivax CSP Frontiers in Cellular and Infection Microbiology | www.frontiersin.org December 2020 | Volume 10 | Article 5910466 We next investigated whether PvCSP-chi protein is expressed at the surface of sporozoites, by performing IFA of live salivary gland sporozoites. Similarly to the results of IFA using fixed/ permeabilized sporozoites, live Pf-PvCSP sporozoites reacted with anti-PvCSP VK210, anti-PvCSP VK247 and anti-PfCSP antibodies whereas WT PfNF54 sporozoites reacted only to anti-PfCSP antibodies (Figure 3A). This result demonstrates that the PvCSPchi protein is expressed at the surface of Pf-PvCSP sporozoites. A B D C FIGURE 1 | Generation and genotyping of the chimeric Pf-PvCSP parasites. A schematic representation of the Cas9 (plasmid Leiden falciparum (pLf) 0019) and donor DNA plasmids (pLf0109) constructs used to introduce the Pvcsp chimeric (Pvcsp-chi) expression cassette into the PfNF54 p47 gene locus. The Pvcsp-chi gene contains a chimeric repeat region of VK210 and VK247 alleles and is under the control of the promoter of the Pfcsp gene. The p47 homology regions (HR1, HR2) used to introduce the donor DNA, location of primers (P), sizes of restriction fragments (HpaI and EcoRI; in red), and PCR amplicons (in black) are indicated. WT, wild type; bsd, blasticidin selectable marker (bsd); hdhfr::yfcu, in donor plasmid. (B) Diagnostic PCRs confirming the correct integration of the Pvcsp-chi expression cassette into the Pfp47 locus. Diagnostic PCR: part of Pvcsp-chi open reading frame (primers P4/P5); part of Pfp47 open reading frame (primers P6/P7); 5’-integration of the plasmid into the Pf-PvCSP-chi genome (5’-Int; primers P1/P2); LR-PCR (primers P1/P3). (C) Southern analysis of HpaI and EcoRI restricted DNA of WT, and chimeric Pf-PvCSP parasites confirms the specific integration of the Pvcsp genes into the Pfp47 gene locus. (D) Growth of asexual blood-stages of Pf-PvCSP cl3 and WT PfNF54. Parasitemia (mean and S.D of 3 independent cultures) is shown during a 3-day culture period (in the semi-automated culture system). Cultures were initiated with a parasitemia of 0.1%. Miyazaki et al. Chimeric P. falciparum Expressing P. vivax CSP Frontiers in Cellular and Infection Microbiology | www.frontiersin.org December 2020 | Volume 10 | Article 5910467 As CSP is shed during parasite gliding motility, we next assessed if PvCSP is also shed similarly to PfCSP by Pf-PvCSP sporozoites. CSP-trails in a sporozoite gliding assay also reacted with both anti-PfCSP and anti PvCSP VK210 antibodies (Figure 3B), confirming surface expression of PvCSP-chi and revealing shedding of PvCSP-chi during gliding. Comparable gliding trails were observed in WT PfNF54 and Pf-PvCSP sporozoites using anti-PfCSP antibody (Figure 3B), with a percentage of 85% gliding trails in WT PfNF54 sporozoites (with a range of 28–65 gliding trails per field, Stdev. 2.6) and 87.0% gliding trails in PfPvCSP sporozoites (with a range of 23–43 gliding trails per field, Stdev 7,6.). Pf-PvCSP Sporozoites Infect Primary Human Hepatocytes We next assessed the in vitro infectivity of Pf-PvCSP sporozoites to primary human hepatocytes. At day 4 post infection of primary human hepatocytes with either WT or Pf-PvCSP sporozoites, the cells were fixed, and liver stages were stained with an anti-PfHSP70 antibody. Pf-PvCSP sporozoites showed comparable efficiency of hepatocyte infection to WT PfNF54 sporozoites (Figure 4). Pf-PvCSP and WT PfNF54 also displayed similar liver stage sizes at day 4 post infection (Figure 4). These results demonstrate that expression of PvCSP-chi at the surface of Pf-PvCSP sporozoites did not reduce parasite in vitro invasion and development in primary human hepatocytes. Immunization of Mice with Pf-PvCSP Sporozoites Induce Antibodies Against Repeats of Both PfCSP and PvCSP-chi We then analyzed the capacity of the Pf-PvCSP sporozoites to elicit the production of antibodies against the repeat sequences of PfCSP and PvCSP-chi by immunizing mice with killed Pf-PvCSP and WT PfNF54 sporozoites. Groups of six C57BL/6 mice were intravenously injected with 10 5 freeze-thaw killed sporozoites, three times with a 7-day interval, and blood was collected from all mice 1 day prior to the first and third immunization and 1 week after the last immunization (Figure 5A). Plasma of these mice was tested for antigen-specific antibody production by ELISA using plates that were coated with the following repeat sequences; (NANP)4NVDPC for PfCSP; GD RAD GQP AGD RAA GQP A for PvCSP VK210; and ANGAGNQPG ANGAGDQPG for PvCSP VK247 strain. Plasma samples of mice immunized with either WT PfNF54 or Pf-PvCSP sporozoites reacted strongly to the PfCSP repeat sequences after the second and third immunization with no significant differences in total IgG between the two groups of mice (Figure 5B), indicating comparable immunogenicity of the PfCSP repeat sequences in WT PfNF54 or Pf-PvCSP sporozoites. In contrast, only mice immunized with Pf-PvCSP sporozoites showed significantly increased antibody titers specific for the repeat sequences of PvCSP VK210 and PvCSP VK247 whereas no significant increase was observed in WT PfNF54-immunized mice (Figure 5B). Although the total IgG against the PvCSP repeats was lower than that against the PfCSP repeats, these results show that exposure to Pf-PvCSP sporozoites can induce the production of antibodies against PfCSP, as well as against both PvCSP repeat variants. DISCUSSION In this study we describe a chimeric P. falciparum line, Pf-PvCSP, which expresses CSP from both P. falciparum and P. vivax.We demonstrate that chimeric parasites produce sporozoites in similar numbers to those of the parental WT PfNF54 line and that both CSPs expressed in the chimeric parasites are present at the sporozoite surface and shed during gliding. Our results show that Pf-PvCSP sporozoites are infectious to primary human hepatocytes. These observations support the notion that the presence of the chimeric PvCSP protein at the surface of P. falciparum sporozoites does not affect sporozoite viability and infectivity. The formation of infective sporozoites expressing CSP of two different Plasmodium species has been previously TABLE 1 | Gametocyte, oocyst, and sporozoite production of Pf-PvCSP and WT NF54 lines. Parasites Gams (%) male/female mean (SD) a Exfl.No mean (SD) b Exfl. Males (%) Mean (SD) c Infected/dissected mosquitoes Oocysts No mean (SD) d Spz No mean e WT NF54 exp. 1 0.45/0.57 366 80 16/18 62 32 K exp. 2 0.47/0.67 401 85 9/12 47 21 K exp. 3 0.52/0.63 (0.03/0.04) 201 (87) 38 (21) 11/12 40 (9.3) 54 K Pf-PvCSP Clone 1 exp. 1 0.8/1.1 623 76 16/16 44 17 K Clone 3 exp. 1 0.6/1.1 696 100 16/16 63 18 K exp. 2 0.3/0.4 641 100 18/18 52 20 K exp. 3 0.7/1.0 (0.2/0.3) 485 (89) 65 (17) 9/9 48 (6.4) 46 K a Mean percentage of stage V male and female gametocytes (per 100 red blood cells) in day 14 gametocyte cultures in one to three experiments (exp.) with standard deviation (SD). b Mean number of exflagellating male gametocytes (per 10 5 red blood cells) at 10–20 min after activation in day 14 gametocyte cultures. c Mean percentage of exflagellating stage V male gametocytes in day 14 gametocyte cultures (1–3 exp.) with standard deviation (SD). d Mean number of oocyst per mosquito at days 10 to 12 after feeding (1–3 exp. per line; 10–30 mosquitoes per exp.). e Mean number of salivary gland sporozoites per mosquito at days 18–24 after feeding. Range corresponds to the mean number of sporozoites in multiple experiments (1–3 exp. per line; 50–90 mosquitoes per exp.). See Figure S3 for a graphic representation of the data of independent experiments. Miyazaki et al. Chimeric P. falciparum Expressing P. vivax CSP Frontiers in Cellular and Infection Microbiology | www.frontiersin.org December 2020 | Volume 10 | Article 5910468 demonstrated in studies using P. berghei expressing PfCSP (Mendes et al., 2018b). However, the viability and infectivity of these chimeric Pb-PfCSP sporozoites is expected, since PfCSP can fully complement the multiple functions of PbCSP as shown in replacement P. berghei lines with the endogenous PbCSP replaced by PfCSP (Triller et al., 2017;Flores-Garcia et al., 2019). This is distinct from PvCSP, since previous attempts to functionally complement PfCSP, by replacing the Pfcsp gene with two Pvcsp alleles, were unsuccessful (Marin-Mogollon et al., 2018). It is known that CSP fulfills multiple functions, both in the process of sporozoite formation and in later processes of sporozoite invasion of salivary glands, migration through the human skin and invasion of hepatocytes (Sinnis and Coppi, 2007;Vaughan et al., 2008; Ejigiri and Sinnis, 2009;Coppi et al., 2011;Vaughan and Kappe, 2017). Although the previously generated gene-replacement Pf-PvCSP parasites were able to produce normal numbers of oocysts, no salivary gland sporozoite were formed andmost oocyst degenerated before sporozoite formation, a phenotype that is comparable to P. falciparum mutants lacking the Pfcsp gene (Marin-Mogollon et al., 2018). Collectively, these observations indicate that PvCSP is unable to fully complement the role of PfCSP in the process of sporozoite formation inside oocysts but that the simultaneous expression of PvCSP with PfCSP in sporozoites of chimeric parasites does not hamper the formation of infectious sporozoites. The lack of full complementation of PfCSP by PvCSP in the process of sporozoite formation may result from the inability of PvCSP to interact with other P. falciparum proteins that are involved in (the initial steps of) sporozoite formation. Our studies of immunization of mice with the chimeric PfPvCSP sporozoites shows that antibodies are induced against the repeat sequences of both PfCSP and the PvCSP-chi protein, including antibody responses against both PvCSP alleles, VK210 and VK247. Interestingly, although IgG responses against PfCSP were significantly higher than against PvCSP, antiPfCSP titers were comparable for mice immunized with either WT PfNF54 sporozoites or Pf-PvCSP sporozoites. These observations indicate that the presence of PvCSP does not affect the immunogenicity of PfCSP with respect to IgG responses against the NANP/NVDP repeats. The lower IgG responses against the two PvCSP repeats compared to the PfCSP NANP/NVDP repeats can be caused by different factors. The PvCSP-chi protein contains only 3 copies of the VK247 and VK210 repeats, while the P. falciparum NF54 CSP protein contains 38 NANP and 4 NVDP repeats (Bowman et al., 1999;Oyen et al., 2018). In addition, although we provide evidence of the presence of PvCSP at the surface of the Pf-PvCSP sporozoites and in gliding trails, the total amount of PfCSP and PvCSP in the Pf-PvCSP sporozoites is unknown and may differ for the two proteins. The lower IgG responses might also result from a lower intrinsic immunogenicity of the PvCSP repeats compared to the P. falciparum NANP/NVDP repeats. The repeat regions of CSP of the P. vivax strains VK210 and VK247 consist of 10–11 copies of the repeats GDRA(A/D)GQPA or ANGA (G/ D)(N/D)QPG, respectively (de Souza-Neiras et al., 2007)] and are not cross reactive (Hall et al., 2019). Of note, our study employed freeze-thaw killed sporozoites to immunize mice; it is FIGURE 2 | Immunofluorescence analyses of PvCSP and PfCSP expression in fixed Pf-PvCSP salivary gland sporozoites. Fixed permeabilized sporozoites of Pf-PvCSP (clone 1 and clone 3) and WT PfNF54 parasites stained with mouse anti-PvCSPVK210, anti-PvCSP VK247 (green; alexa 488) and antiPfCSP antibodies (red; alexa 594). Nuclei stained with the Hoechst-33342. Control negative, corresponds to the incubation without the primary antibody (2 experiments). Scale bar is 5 µm. Miyazaki et al. Chimeric P. falciparum Expressing P. vivax CSP Frontiers in Cellular and Infection Microbiology | www.frontiersin.org December 2020 | Volume 10 | Article 5910469